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X-WR-CALNAME:Institute for Quantitative and Computational Biosciences
X-ORIGINAL-URL:https://qcb.ucla.edu
X-WR-CALDESC:Events for Institute for Quantitative and Computational Biosciences
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BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190402T133000
DTEND;TZID=America/Los_Angeles:20190402T163000
DTSTAMP:20260618T145632
CREATED:20190226T194825Z
LAST-MODIFIED:20190226T195739Z
UID:8886-1554211800-1554222600@qcb.ucla.edu
SUMMARY:Introduction to Python - Day One
DESCRIPTION:This workshop covers the basic concepts of Python programming. The course is supplemented with many hands-on exercises with emphasis given towards computational biology use cases.
URL:https://qcb.ucla.edu/event/introduction-to-python-day-one-3/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2019/02/S19-02-W9-Python.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190402T093000
DTEND;TZID=America/Los_Angeles:20190402T123000
DTSTAMP:20260618T145632
CREATED:20190226T194825Z
LAST-MODIFIED:20190226T195629Z
UID:8884-1554197400-1554208200@qcb.ucla.edu
SUMMARY:Introduction to Unix - Day Two
DESCRIPTION:Unix is a command-line-based platform that is a highly powerful and flexible tool for data management and analysis. First\, this workshop introduces the basic concepts of UNIX operating system and shell scripting. We will explore essential hands-on skills to confidently use the command line interface on either a local (laptop) or a remote (hoffman2 cluster) computer running the Unix system. Next\, this workshop covers how to navigate around the Unix file system from the command line and use a number of basic\, common Unix commands. The course is supplemented with many hands-on examples. No prior knowledge of Unix or programming is required.
URL:https://qcb.ucla.edu/event/introduction-to-unix-day-two-3/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2019/02/S19-01-W1-Unix.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190401T093000
DTEND;TZID=America/Los_Angeles:20190401T123000
DTSTAMP:20260618T145632
CREATED:20190226T194825Z
LAST-MODIFIED:20190226T195527Z
UID:8883-1554111000-1554121800@qcb.ucla.edu
SUMMARY:Introduction to Unix - Day One
DESCRIPTION:Unix is a command-line-based platform that is a highly powerful and flexible tool for data management and analysis. First\, this workshop introduces the basic concepts of UNIX operating system and shell scripting. We will explore essential hands-on skills to confidently use the command line interface on either a local (laptop) or a remote (hoffman2 cluster) computer running the Unix system. Next\, this workshop covers how to navigate around the Unix file system from the command line and use a number of basic\, common Unix commands. The course is supplemented with many hands-on examples. No prior knowledge of Unix or programming is required.
URL:https://qcb.ucla.edu/event/introduction-to-unix-day-one-3/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2019/02/S19-01-W1-Unix.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190315T130000
DTEND;TZID=America/Los_Angeles:20190315T140000
DTSTAMP:20260618T145632
CREATED:20190110T003640Z
LAST-MODIFIED:20190311T163714Z
UID:8486-1552654800-1552658400@qcb.ucla.edu
SUMMARY:QCB Seminar: Dr. Massimo Vergassola\, UCSD
DESCRIPTION:Learning to Soar \nMASSIMO VERGASSOLA \nProfessor\nDepartment of Physics\nUniversity of California\, San Diego \n  \nMarch 15\, 2019 \n1:00PM to 2:00PM \nBOYER HALL 159 \n  \n \n  \n— \n  \nFRONTIERS IN QUANTITATIVE AND SYSTEMS BIOLOGY SEMINAR SERIES \n  \nJANUARY 11 – MARCH 15\, 2019 \n  \nSeminars are held Fridays 1-2pm in Boyer Hall. \nAll seminars are free and open to the public. \n  \nA speaker series sponsored by the Department of Biomathematics and the Institute for Quantitative and Computational Biosciences (QCBio).
URL:https://qcb.ucla.edu/event/qcb-seminar-dr-massimo-vergassola-ucsd/
LOCATION:Boyer Hall 159
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2019/01/2019-03-15-MASSIMO-VERGASSOLA.png
ORGANIZER;CN="Lana Martin":MAILTO:lana.martin@lifesci.ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190313T133000
DTEND;TZID=America/Los_Angeles:20190313T153000
DTSTAMP:20260618T145632
CREATED:20181108T195418Z
LAST-MODIFIED:20181115T001943Z
UID:8092-1552483800-1552491000@qcb.ucla.edu
SUMMARY:Galaxy for NGS Data Analysis - Day Two
DESCRIPTION:Galaxy is a web-based infrastructure for bioinformatics application. First\, this workshop introduces participants to using Galaxy for analysis of Next-Generation Sequencing data. Next\, this workshop covers the structure of Galaxy\, data format and manipulation\, obtaining and sharing data\, and building and sharing workflows. We will use the tools installed on the UCLA galaxy to perform a few types of NGS analysis.
URL:https://qcb.ucla.edu/event/galaxy-for-ngs-data-analysis-day-two-2/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-16-Galaxy-for-NGS.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190312T133000
DTEND;TZID=America/Los_Angeles:20190312T153000
DTSTAMP:20260618T145632
CREATED:20181108T195417Z
LAST-MODIFIED:20181115T002042Z
UID:8091-1552397400-1552404600@qcb.ucla.edu
SUMMARY:Galaxy for NGS Data Analysis - Day One
DESCRIPTION:Galaxy is a web-based infrastructure for bioinformatics application. First\, this workshop introduces participants to using Galaxy for analysis of Next-Generation Sequencing data. Next\, this workshop covers the structure of Galaxy\, data format and manipulation\, obtaining and sharing data\, and building and sharing workflows. We will use the tools installed on the UCLA galaxy to perform a few types of NGS analysis.
URL:https://qcb.ucla.edu/event/galaxy-for-ngs-data-analysis-day-one-2/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-16-Galaxy-for-NGS.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190308T130000
DTEND;TZID=America/Los_Angeles:20190308T140000
DTSTAMP:20260618T145632
CREATED:20190110T003442Z
LAST-MODIFIED:20190305T003629Z
UID:8482-1552050000-1552053600@qcb.ucla.edu
SUMMARY:QCB Seminar: Dr. Nicolas Buchler\, North Carolina State University
DESCRIPTION:Gene Expression Noise Accelerates the Evolution of a Biological Oscillator \nNICOLAS BUCHLER\nAssociate Professor\nVeterinary Medicine\nNorth Carolina State University \n  \nMarch 8\, 2019 \n1:00PM to 2:00PM \nBOYER HALL 159 \n  \n \n  \n— \n  \nFRONTIERS IN QUANTITATIVE AND SYSTEMS BIOLOGY SEMINAR SERIES \n  \nJANUARY 11 – MARCH 15\, 2019 \n  \nSeminars are held Fridays 1-2pm in Boyer Hall. \nAll seminars are free and open to the public. \n  \nA speaker series sponsored by the Department of Biomathematics and the Institute for Quantitative and Computational Biosciences (QCBio).
URL:https://qcb.ucla.edu/event/qcb-seminar-dr-nicolas-buchler-north-carolina-state-university/
LOCATION:Boyer Hall 159
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2019/01/2019-03-08-NICOLAS-BUCHLER.png
ORGANIZER;CN="Lana Martin":MAILTO:lana.martin@lifesci.ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190307T090000
DTEND;TZID=America/Los_Angeles:20190307T120000
DTSTAMP:20260618T145632
CREATED:20181108T195415Z
LAST-MODIFIED:20181115T002108Z
UID:8090-1551949200-1551960000@qcb.ucla.edu
SUMMARY:Digital Imaging Processing in Python - Day Three
DESCRIPTION:Imaging datasets are becoming easier to acquire yet more difficult to analyze. First\, this workshop introduces computational tools available for manipulating images and extracting quantitative information. Next\, this workshop covers image conversion and handling in Python\, different methods for normalizing\, aligning and segmenting images\, and applying these techniques to a full image processing pipeline. We will focus on cellular imaging; however\, much of the techniques are broadly applicable to other data types.
URL:https://qcb.ucla.edu/event/digital-imaging-processing-in-python-day-three-2/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-15-Digital-Imaging.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190306T090000
DTEND;TZID=America/Los_Angeles:20190306T120000
DTSTAMP:20260618T145632
CREATED:20181108T195414Z
LAST-MODIFIED:20181115T002121Z
UID:8089-1551862800-1551873600@qcb.ucla.edu
SUMMARY:Digital Imaging Processing in Python - Day Two
DESCRIPTION:Imaging datasets are becoming easier to acquire yet more difficult to analyze. First\, this workshop introduces computational tools available for manipulating images and extracting quantitative information. Next\, this workshop covers image conversion and handling in Python\, different methods for normalizing\, aligning and segmenting images\, and applying these techniques to a full image processing pipeline. We will focus on cellular imaging; however\, much of the techniques are broadly applicable to other data types.
URL:https://qcb.ucla.edu/event/digital-imaging-processing-in-python-day-two-2/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-15-Digital-Imaging.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190305T090000
DTEND;TZID=America/Los_Angeles:20190305T120000
DTSTAMP:20260618T145632
CREATED:20181108T195413Z
LAST-MODIFIED:20181115T002139Z
UID:8088-1551776400-1551787200@qcb.ucla.edu
SUMMARY:Digital Imaging Processing in Python - Day One
DESCRIPTION:Imaging datasets are becoming easier to acquire yet more difficult to analyze. First\, this workshop introduces computational tools available for manipulating images and extracting quantitative information. Next\, this workshop covers image conversion and handling in Python\, different methods for normalizing\, aligning and segmenting images\, and applying these techniques to a full image processing pipeline. We will focus on cellular imaging; however\, much of the techniques are broadly applicable to other data types.
URL:https://qcb.ucla.edu/event/digital-imaging-processing-in-python-day-one-2/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-15-Digital-Imaging.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190301T130000
DTEND;TZID=America/Los_Angeles:20190301T140000
DTSTAMP:20260618T145632
CREATED:20190110T003241Z
LAST-MODIFIED:20190225T203605Z
UID:8478-1551445200-1551448800@qcb.ucla.edu
SUMMARY:QCB Seminar: Dr. Kirill Korolev\, Boston University
DESCRIPTION:The Role of Space in Population Dynamics \nKIRILL KOROLEV\nAssistant Professor\nDepartment of Physics\nBoston University \n  \nMarch 1\, 2019 \n1:00PM to 2:00PM \nBOYER HALL 159 \n  \n \n  \n— \n  \nFRONTIERS IN QUANTITATIVE AND SYSTEMS BIOLOGY SEMINAR SERIES \n  \nJANUARY 11 – MARCH 15\, 2019 \n  \nSeminars are held Fridays 1-2pm in Boyer Hall. \nAll seminars are free and open to the public. \n  \nA speaker series sponsored by the Department of Biomathematics and the Institute for Quantitative and Computational Biosciences (QCBio).
URL:https://qcb.ucla.edu/event/qcb-seminar-dr-kirill-korolev-boston-university/
LOCATION:Boyer Hall 159
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2019/01/2019-03-01-KIRILL-KOROLEV.png
ORGANIZER;CN="Lana Martin":MAILTO:lana.martin@lifesci.ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190228T090000
DTEND;TZID=America/Los_Angeles:20190228T120000
DTSTAMP:20260618T145632
CREATED:20181108T195412Z
LAST-MODIFIED:20181115T002214Z
UID:8087-1551344400-1551355200@qcb.ucla.edu
SUMMARY:Variant Discovery with GATK - Day Three
DESCRIPTION:This course is designed to take researchers with no genomic experience through variant calling based on the Broad InstituteÕs best practices for GATK. This workshop will be designed to take users from raw sequence data to called variants with emphasis placed on understanding when to apply the best practices or when a particular study or system dictates that you deviate from them. WeÕll emphasize reproducibility of data processing and combining data sets with shell scripts and for-loops to minimize accidental processing errors. By the end of the course\, students should feel comfortable working through their own data and have sufficient knowledge to know when and how to deviate from best practices.
URL:https://qcb.ucla.edu/event/variant-discovery-with-gatk-day-three/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-14-Variant-Discovery.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190227T090000
DTEND;TZID=America/Los_Angeles:20190227T120000
DTSTAMP:20260618T145632
CREATED:20181108T195410Z
LAST-MODIFIED:20181115T002230Z
UID:8086-1551258000-1551268800@qcb.ucla.edu
SUMMARY:Variant Discovery with GATK - Day Two
DESCRIPTION:This course is designed to take researchers with no genomic experience through variant calling based on the Broad InstituteÕs best practices for GATK. This workshop will be designed to take users from raw sequence data to called variants with emphasis placed on understanding when to apply the best practices or when a particular study or system dictates that you deviate from them. WeÕll emphasize reproducibility of data processing and combining data sets with shell scripts and for-loops to minimize accidental processing errors. By the end of the course\, students should feel comfortable working through their own data and have sufficient knowledge to know when and how to deviate from best practices.
URL:https://qcb.ucla.edu/event/variant-discovery-with-gatk-day-two/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-14-Variant-Discovery.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190226T090000
DTEND;TZID=America/Los_Angeles:20190226T120000
DTSTAMP:20260618T145632
CREATED:20181108T195409Z
LAST-MODIFIED:20181115T002244Z
UID:8085-1551171600-1551182400@qcb.ucla.edu
SUMMARY:Variant Discovery with GATK - Day One
DESCRIPTION:This course is designed to take researchers with no genomic experience through variant calling based on the Broad InstituteÕs best practices for GATK. This workshop will be designed to take users from raw sequence data to called variants with emphasis placed on understanding when to apply the best practices or when a particular study or system dictates that you deviate from them. WeÕll emphasize reproducibility of data processing and combining data sets with shell scripts and for-loops to minimize accidental processing errors. By the end of the course\, students should feel comfortable working through their own data and have sufficient knowledge to know when and how to deviate from best practices.
URL:https://qcb.ucla.edu/event/variant-discovery-with-gatk-day-one/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-14-Variant-Discovery.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190222T130000
DTEND;TZID=America/Los_Angeles:20190222T140000
DTSTAMP:20260618T145632
CREATED:20190110T003041Z
LAST-MODIFIED:20190219T214418Z
UID:8474-1550840400-1550844000@qcb.ucla.edu
SUMMARY:QCB Seminar: Dr. Matt Thomson\, Caltech
DESCRIPTION:Building Low-dimensional Models from High-dimensional Single Cell Data \nMATT THOMSON\nAssistant Professor\nDivision of Biology and Biological\nEngineering\nCaltech \n  \nFebruary 22\, 2019 \n1:00PM to 2:00PM \nBOYER HALL 159 \n  \n \n— \n  \nFRONTIERS IN QUANTITATIVE AND SYSTEMS BIOLOGY SEMINAR SERIES \n  \nJANUARY 11 – MARCH 15\, 2019 \n  \nSeminars are held Fridays 1-2pm in Boyer Hall. \nAll seminars are free and open to the public. \n  \nA speaker series sponsored by the Department of Biomathematics and the Institute for Quantitative and Computational Biosciences (QCBio).
URL:https://qcb.ucla.edu/event/qcb-seminar-dr-matt-thomson-caltech/
LOCATION:Boyer Hall 159
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2019/01/2019-02-22-MATT-THOMSON.png
ORGANIZER;CN="Lana Martin":MAILTO:lana.martin@lifesci.ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190221T133000
DTEND;TZID=America/Los_Angeles:20190221T153000
DTSTAMP:20260618T145632
CREATED:20181108T195409Z
LAST-MODIFIED:20181115T002302Z
UID:8084-1550755800-1550763000@qcb.ucla.edu
SUMMARY:Introduction to MATLAB - Day Three
DESCRIPTION:MATLAB is a powerful\, high-level programing language for numerical computation\, visualization\, and application development. First\, this workshop introduces the MATLAB environment. Next\, this workshop covers working with arrays and matrices\, loops and conditional statements\, writing your own functions\, working with files\, and visualizing your data. We will use MATLAB to solve differential equations and conduct basic computational systems modeling. This workshop is suitable for those with or without coding experience in other languages. No computational knowledge is assumed and no prerequisite workshops are required; however\, the Unix workshop (workshop 1) may be a useful foundation.
URL:https://qcb.ucla.edu/event/introduction-to-matlab-day-three/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-13-Intro-to-Matlab.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190220T133000
DTEND;TZID=America/Los_Angeles:20190220T153000
DTSTAMP:20260618T145632
CREATED:20181108T195408Z
LAST-MODIFIED:20181115T002335Z
UID:8083-1550669400-1550676600@qcb.ucla.edu
SUMMARY:Introduction to MATLAB - Day Two
DESCRIPTION:MATLAB is a powerful\, high-level programing language for numerical computation\, visualization\, and application development. First\, this workshop introduces the MATLAB environment. Next\, this workshop covers working with arrays and matrices\, loops and conditional statements\, writing your own functions\, working with files\, and visualizing your data. We will use MATLAB to solve differential equations and conduct basic computational systems modeling. This workshop is suitable for those with or without coding experience in other languages. No computational knowledge is assumed and no prerequisite workshops are required; however\, the Unix workshop (workshop 1) may be a useful foundation.
URL:https://qcb.ucla.edu/event/introduction-to-matlab-day-two/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-13-Intro-to-Matlab.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190219T133000
DTEND;TZID=America/Los_Angeles:20190219T153000
DTSTAMP:20260618T145632
CREATED:20181108T195406Z
LAST-MODIFIED:20181115T002351Z
UID:8082-1550583000-1550590200@qcb.ucla.edu
SUMMARY:Introduction to MATLAB - Day One
DESCRIPTION:MATLAB is a powerful\, high-level programing language for numerical computation\, visualization\, and application development. First\, this workshop introduces the MATLAB environment. Next\, this workshop covers working with arrays and matrices\, loops and conditional statements\, writing your own functions\, working with files\, and visualizing your data. We will use MATLAB to solve differential equations and conduct basic computational systems modeling. This workshop is suitable for those with or without coding experience in other languages. No computational knowledge is assumed and no prerequisite workshops are required; however\, the Unix workshop (workshop 1) may be a useful foundation.
URL:https://qcb.ucla.edu/event/introduction-to-matlab-day-one/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-13-Intro-to-Matlab.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190215T130000
DTEND;TZID=America/Los_Angeles:20190215T140000
DTSTAMP:20260618T145632
CREATED:20190110T002842Z
LAST-MODIFIED:20190110T002842Z
UID:8470-1550235600-1550239200@qcb.ucla.edu
SUMMARY:QCB Seminar: Dr. Victoria Booth\, University of Michigan
DESCRIPTION:Mapping Circadian Modulation of Sleep-wake Dynamics \nVICTORIA BOOTH\nAssociate Professor\nDepartment of Mathematics\nUniversity of Michigan \n  \nFebruary 15\, 2019 \n1:00PM to 2:00PM \nBOYER HALL 159 \n  \n \n  \n— \n  \nFRONTIERS IN QUANTITATIVE AND SYSTEMS BIOLOGY SEMINAR SERIES \n  \nJANUARY 11 – MARCH 15\, 2019 \n  \nSeminars are held Fridays 1-2pm in Boyer Hall. \nAll seminars are free and open to the public. \n  \nA speaker series sponsored by the Department of Biomathematics and the Institute for Quantitative and Computational Biosciences (QCBio).
URL:https://qcb.ucla.edu/event/qcb-seminar-dr-victoria-booth-university-of-michigan/
LOCATION:Boyer Hall 159
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2019/01/2019-02-15-VICTORIA-BOOTH.png
ORGANIZER;CN="Lana Martin":MAILTO:lana.martin@lifesci.ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190214T133000
DTEND;TZID=America/Los_Angeles:20190214T153000
DTSTAMP:20260618T145632
CREATED:20181108T195405Z
LAST-MODIFIED:20181115T002413Z
UID:8081-1550151000-1550158200@qcb.ucla.edu
SUMMARY:Metagenomics Analysis - Day Three
DESCRIPTION:This workshop provides an introduction to the microbiome analyses from the raw sequence data generated from the next-generation sequencing platforms. We will cover how to perform the 16S rRNA-based analysis using an open-source bioinformatics pipeline QIIME. We will also cover some downstream analyses of the microbiome data beyond QIIME\, including statistical analyses and functional analyses.
URL:https://qcb.ucla.edu/event/metagenomics-analysis-day-three/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-12-Metagenomics.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190214T090000
DTEND;TZID=America/Los_Angeles:20190214T120000
DTSTAMP:20260618T145632
CREATED:20181108T195403Z
LAST-MODIFIED:20181115T002517Z
UID:8078-1550134800-1550145600@qcb.ucla.edu
SUMMARY:Machine Learning in Python - Day Three
DESCRIPTION:Applications of Machine Learning can be used to analyze biological data without the need of advanced programming skills. For example\, Machine Learning techniques can be used to construct predictive models based on a set of training examples\, to remove noise and spurious artifacts from data (e.g. photobleaching)\, or to help visualize trends within high dimensional datasets\, etc. First\, this workshop introduces the basic principles involved in the applications mentioned above\, such as pattern recognition\, linear and non-linear regression\, and cluster analysis. This workshop will be oriented towards hands-on activities\, starting from the basics of how to load and prepare biological datasets in a Python environment. By the end of this workshop\, students will be able to use Scikit-Learn’s documentation (and other libraries) to build models based on their own data\, assess their performance\, and make new predictions. Although no advanced knowledge will be assumed\, students are encouraged to attend to the Advanced Python and Modern Statistics workshops.
URL:https://qcb.ucla.edu/event/machine-learning-in-python-day-three-2/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-11-Machine-Learning.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190213T133000
DTEND;TZID=America/Los_Angeles:20190213T153000
DTSTAMP:20260618T145632
CREATED:20181108T195404Z
LAST-MODIFIED:20181115T002432Z
UID:8080-1550064600-1550071800@qcb.ucla.edu
SUMMARY:Metagenomics Analysis - Day Two
DESCRIPTION:This workshop provides an introduction to the microbiome analyses from the raw sequence data generated from the next-generation sequencing platforms. We will cover how to perform the 16S rRNA-based analysis using an open-source bioinformatics pipeline QIIME. We will also cover some downstream analyses of the microbiome data beyond QIIME\, including statistical analyses and functional analyses.
URL:https://qcb.ucla.edu/event/metagenomics-analysis-day-two/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-12-Metagenomics.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190213T090000
DTEND;TZID=America/Los_Angeles:20190213T120000
DTSTAMP:20260618T145632
CREATED:20181108T195402Z
LAST-MODIFIED:20181115T002531Z
UID:8077-1550048400-1550059200@qcb.ucla.edu
SUMMARY:Machine Learning in Python - Day Two
DESCRIPTION:Applications of Machine Learning can be used to analyze biological data without the need of advanced programming skills. For example\, Machine Learning techniques can be used to construct predictive models based on a set of training examples\, to remove noise and spurious artifacts from data (e.g. photobleaching)\, or to help visualize trends within high dimensional datasets\, etc. First\, this workshop introduces the basic principles involved in the applications mentioned above\, such as pattern recognition\, linear and non-linear regression\, and cluster analysis. This workshop will be oriented towards hands-on activities\, starting from the basics of how to load and prepare biological datasets in a Python environment. By the end of this workshop\, students will be able to use Scikit-Learn’s documentation (and other libraries) to build models based on their own data\, assess their performance\, and make new predictions. Although no advanced knowledge will be assumed\, students are encouraged to attend to the Advanced Python and Modern Statistics workshops.
URL:https://qcb.ucla.edu/event/machine-learning-in-python-day-two-2/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-11-Machine-Learning.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190212T133000
DTEND;TZID=America/Los_Angeles:20190212T153000
DTSTAMP:20260618T145632
CREATED:20181108T195403Z
LAST-MODIFIED:20181115T002447Z
UID:8079-1549978200-1549985400@qcb.ucla.edu
SUMMARY:Metagenomics Analysis - Day One
DESCRIPTION:This workshop provides an introduction to the microbiome analyses from the raw sequence data generated from the next-generation sequencing platforms. We will cover how to perform the 16S rRNA-based analysis using an open-source bioinformatics pipeline QIIME. We will also cover some downstream analyses of the microbiome data beyond QIIME\, including statistical analyses and functional analyses.
URL:https://qcb.ucla.edu/event/metagenomics-analysis-day-one/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-12-Metagenomics.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190212T090000
DTEND;TZID=America/Los_Angeles:20190212T120000
DTSTAMP:20260618T145632
CREATED:20181108T195401Z
LAST-MODIFIED:20181115T002549Z
UID:8076-1549962000-1549972800@qcb.ucla.edu
SUMMARY:Machine Learning in Python - Day One
DESCRIPTION:Applications of Machine Learning can be used to analyze biological data without the need of advanced programming skills. For example\, Machine Learning techniques can be used to construct predictive models based on a set of training examples\, to remove noise and spurious artifacts from data (e.g. photobleaching)\, or to help visualize trends within high dimensional datasets\, etc. First\, this workshop introduces the basic principles involved in the applications mentioned above\, such as pattern recognition\, linear and non-linear regression\, and cluster analysis. This workshop will be oriented towards hands-on activities\, starting from the basics of how to load and prepare biological datasets in a Python environment. By the end of this workshop\, students will be able to use Scikit-Learn’s documentation (and other libraries) to build models based on their own data\, assess their performance\, and make new predictions. Although no advanced knowledge will be assumed\, students are encouraged to attend to the Advanced Python and Modern Statistics workshops.
URL:https://qcb.ucla.edu/event/machine-learning-in-python-day-one-2/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-11-Machine-Learning.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190208T130000
DTEND;TZID=America/Los_Angeles:20190208T140000
DTSTAMP:20260618T145632
CREATED:20190110T001832Z
LAST-MODIFIED:20190205T175826Z
UID:8466-1549630800-1549634400@qcb.ucla.edu
SUMMARY:QCB Seminar: Dr. Julie Theriot\, University of Washington
DESCRIPTION:Harnessing the Power of Machine Learning for Quantitative Microscopy in Cell Biology \nJULIE THERIOT\nProfessor\nDepartment of Biology\nUniversity of Washington \nFebruary 8\, 2019 \n1:00PM to 2:00PM \nBOYER HALL 130 \n  \n \n  \n— \n  \nFRONTIERS IN QUANTITATIVE AND SYSTEMS BIOLOGY SEMINAR SERIES \n  \nJANUARY 11 – MARCH 15\, 2019 \n  \nSeminars are held Fridays 1-2pm in Boyer Hall. \nAll seminars are free and open to the public. \n  \nA speaker series sponsored by the Department of Biomathematics and the Institute for Quantitative and Computational Biosciences (QCBio).
URL:https://qcb.ucla.edu/event/qcb-seminar-dr-julie-theriot-university-of-washington/
LOCATION:Boyer Hall 130
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2019/01/2019-02-08-JULIE-THERIOT.png
ORGANIZER;CN="Lana Martin":MAILTO:lana.martin@lifesci.ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190207T093000
DTEND;TZID=America/Los_Angeles:20190207T113000
DTSTAMP:20260618T145632
CREATED:20181108T195400Z
LAST-MODIFIED:20181115T002609Z
UID:8075-1549531800-1549539000@qcb.ucla.edu
SUMMARY:RNA-Seq Analysis II - Day Two
DESCRIPTION:RNA sequencing uses next-generation sequencing to reveal the presence and quantity of RNA in a biological sample at a given moment. First\, this workshop introduces key tools developed for analysis of gene expression data from read counts to biology using R. To facilitate learning\, we will use a real case-study-based approach appropriate for Illumina read data (same as RNA-seq I).
URL:https://qcb.ucla.edu/event/rna-seq-analysis-ii-day-two-2/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-10-RNA-seq-II.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190206T130000
DTEND;TZID=America/Los_Angeles:20190206T160000
DTSTAMP:20260618T145632
CREATED:20181108T195358Z
LAST-MODIFIED:20181115T002651Z
UID:8073-1549458000-1549468800@qcb.ucla.edu
SUMMARY:Introduction to Phylogenetics - Day Three
DESCRIPTION:This workshop presents the scientific basis behind the different approaches in phylogenetics and the tools used for these analyses. Practical aspects of the use of these tools will be discussed.
URL:https://qcb.ucla.edu/event/introduction-to-phylogenetics-day-three/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-09-Intro-to-Phylogenetics.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190205T130000
DTEND;TZID=America/Los_Angeles:20190205T160000
DTSTAMP:20260618T145632
CREATED:20181108T195356Z
LAST-MODIFIED:20181115T002705Z
UID:8072-1549371600-1549382400@qcb.ucla.edu
SUMMARY:Introduction to Phylogenetics - Day Two
DESCRIPTION:This workshop presents the scientific basis behind the different approaches in phylogenetics and the tools used for these analyses. Practical aspects of the use of these tools will be discussed.
URL:https://qcb.ucla.edu/event/introduction-to-phylogenetics-day-two/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-09-Intro-to-Phylogenetics.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Los_Angeles:20190205T093000
DTEND;TZID=America/Los_Angeles:20190205T113000
DTSTAMP:20260618T145632
CREATED:20181108T195359Z
LAST-MODIFIED:20181115T002628Z
UID:8074-1549359000-1549366200@qcb.ucla.edu
SUMMARY:RNA-Seq Analysis II - Day One
DESCRIPTION:RNA sequencing uses next-generation sequencing to reveal the presence and quantity of RNA in a biological sample at a given moment. First\, this workshop introduces key tools developed for analysis of gene expression data from read counts to biology using R. To facilitate learning\, we will use a real case-study-based approach appropriate for Illumina read data (same as RNA-seq I).
URL:https://qcb.ucla.edu/event/rna-seq-analysis-ii-day-one-2/
LOCATION:The Collaboratory\, 610 Charles E Young Drive East - BOYER HALL ROOM 529\, Los Angeles\, CA\, 90095\, United States
CATEGORIES:Interactive Workshop
ATTACH;FMTTYPE=image/png:https://wp-misc.lifesci.ucla.edu/qcb/wp-content/uploads/sites/14/2018/11/W19-10-RNA-seq-II.png
ORGANIZER;CN="QCB Collaboratory":MAILTO:collaboratory@ucla.edu
END:VEVENT
END:VCALENDAR