W32: GitHub/Docker

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

Learn how to make your applications ready for production and distribution. This workshop will give you your introduction to setting up version control and containerization for your applications to ensure […]

W16: Library Prep for NGS

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

This workshop will cover the basis of Next-Gen Sequencing Library Preparation for Illumina Sequencers. Different Library Preparation Techniques (DNA-seq, ChIP-seq, RNA-seq, Methyl-seq) are explained the first and second day in […]

W13: Genetic Analysis (VCF-Plink)

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

High-throughput sequencing technologies have allowed researchers to extract DNA at the individual, population, and species levels. In this workshop, students will learn how to analyze and interpret population-level genetic information […]

W5a: RNA-seq I Analysis

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

RNA-seq I aims to provide an introduction and the basics tools to process raw RNA-seq data on a cluster machine (Hoffman2). The workshop can serve also as a starting point […]

W5b: RNA-Seq II Analysis

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

RNA-seq II aims to provide tools for analysis of gene expression data from read counts to biology using R. To facilitate learning, the workshop will use a real case study […]

W20: Single-Cell RNA-Seq Analysis with Python

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

This workshop aims to introduce the basic concepts and algorithms for single-cell RNA-seq analysis. It will help participants obtain a better idea of how to use scRNA-seq technology, from considerations […]

W33: Analysis of Electronic Health Records

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

The UCLA ATLAS Precision Health Biobank integrates genetic information and de-identified medical records to enable precision health research. This introductory workshop will cover the basics of extracting health-related phenotypes from […]