This course is designed to take researchers with no genomic experience through variant calling based on the Broad InstituteÕs best practices for GATK. This workshop will be designed to take users from raw sequence data to called variants with emphasis placed on understanding when to apply the best practices or when a particular study or system dictates that you deviate from them. WeÕll emphasize reproducibility of data processing and combining data sets with shell scripts and for-loops to minimize accidental processing errors. By the end of the course, students should feel comfortable working through their own data and have sufficient knowledge to know when and how to deviate from best practices.
- This event has passed.
Variant Discovery with GATK – Day One
February 26, 2019 @ 9:00 am - 12:00 pm
- FreeDetails
- Date:
- February 26, 2019
- Time:
-
9:00 am - 12:00 pm
- Cost:
- Free
- Event Category:
- Interactive Workshop
- Event Tags:
- VariantDiscovery, GATK, Workshop, Sequencing, VariantCalling
- Website:
- https://qcb.ucla.edu/collaboratory/workshops/w8-variant-discovery-with-gatk/
Organizer
- QCB Collaboratory
- Phone
- 310-825-2917
- collaboratory@ucla.edu
- View Organizer Website
Venue
- The Collaboratory
-
610 Charles E Young Drive East - BOYER HALL ROOM 529
Los Angeles, CA 90095 United States + Google Map - Phone
- (310) 825-2917
Details
- Date:
- February 26, 2019
- Time:
-
9:00 am - 12:00 pm
- Cost:
- Free
- Event Category:
- Interactive Workshop
- Event Tags:
- VariantDiscovery, GATK, Workshop, Sequencing, VariantCalling
- Website:
- https://qcb.ucla.edu/collaboratory/workshops/w8-variant-discovery-with-gatk/
Organizer
- QCB Collaboratory
- Phone
- 310-825-2917
- collaboratory@ucla.edu
- View Organizer Website
Venue
- The Collaboratory
-
610 Charles E Young Drive East - BOYER HALL ROOM 529
Los Angeles, CA 90095 United States + Google Map - Phone
- (310) 825-2917
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Here are some interesting links for you! Enjoy your stay :)Pages
- #5439 (no title)
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