RNA-seq I aims to provide an introduction and the basics tools to process raw RNA-seq data on a cluster machine (Hoffman2). The workshop can serve also as a starting point […]
TITLE: "TBD" Hosted by Jingyi Jessica Li for Bioinformatics
RNA-seq II aims to provide tools for analysis of gene expression data from read counts to biology using R. To facilitate learning, the workshop will use a real case study […]
TITLE: "A Non-Invasive Epigenetic Measure of Inflammation." ABSTRACT: Existing epigenetic phenotype tests often lack mechanistic explanations of the observed correlations between specific methylation sites and phenotypes. This raises the crucial […]
TITLE: "scDEED: a statistical method for detecting dubious 2D single-cell embeddings and optimizing t-SNE and UMAP hyperparameters." ABSTRACT: Two-dimensional (2D) embedding methods are crucial for single-cell data visualization. Popular methods […]
TITLE: "An updated movement path randomization method to distinguish social and spatial drivers of animal interactions." ABSTRACT: Studying the spatial-social interface requires tools that distinguish between social and spatial drivers of interactions. Testing […]
TITLE: "Detection of Symptoms of Depression Using Data From the iPhone and Apple Watch." ABSTRACT: Digital health data from consumer wearable devices and smartphones have the potential to improve our […]
TITLE: "ChatGPT for Clinical Informatics: what can LLMs do now for Health AI?” Hosted by William Hsu for Medical Informatics
The UCLA ATLAS Precision Health Biobank integrates genetic information and de-identified medical records to enable precision health research. This introductory workshop will cover the basics of extracting health-related phenotypes from […]
12pm: Emily Maciejewski (Ernst), Grad Student, Computer Science TITLE: “Cross-species and tissue imputation of species-level DNA methylation samples” ABSTRACT: DNA methylation data is highly informative to study a variety of […]