Our Collaboratory Fellows have published papers on a variety of research topics, stemming from both their home labs and Collaboratory-supported collaborations across campus.
Find us on Google Scholar: https://scholar.google.com/citations?user=XN6DdggAAAAJ&hl=en
2018 |
Thorsson, Vésteinn; Gibbs, David L; Brown, Scott D; Wolf, Denise; Bortone, Dante S; Yang, Tai-Hsien Ou; Porta-Pardo, Eduard; Gao, Galen F; Plaisier, Christopher L; Eddy, James A; others, The immune landscape of cancer Journal Article Immunity, 48 (4), pp. 812–830, 2018. @article{thorsson2018immune, title = {The immune landscape of cancer}, author = {Vésteinn Thorsson and David L Gibbs and Scott D Brown and Denise Wolf and Dante S Bortone and Tai-Hsien Ou Yang and Eduard Porta-Pardo and Galen F Gao and Christopher L Plaisier and James A Eddy and others}, url = {https://doi.org/10.1016/j.immuni.2018.03.023}, doi = {10.1016/j.immuni.2018.03.023}, year = {2018}, date = {2018-01-01}, journal = {Immunity}, volume = {48}, number = {4}, pages = {812--830}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Ricketts, Christopher J; Cubas, Aguirre De A; Fan, Huihui; Smith, Christof C; Lang, Martin; Reznik, Ed; Bowlby, Reanne; Gibb, Ewan A; Akbani, Rehan; Beroukhim, Rameen; others, The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma Journal Article Cell reports, 23 (1), pp. 313–326, 2018. @article{ricketts2018cancer, title = {The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma}, author = {Christopher J Ricketts and Aguirre A De Cubas and Huihui Fan and Christof C Smith and Martin Lang and Ed Reznik and Reanne Bowlby and Ewan A Gibb and Rehan Akbani and Rameen Beroukhim and others}, url = {https://doi.org/10.1016/j.celrep.2018.03.075}, doi = {10.1016/j.celrep.2018.03.075}, year = {2018}, date = {2018-01-01}, journal = {Cell reports}, volume = {23}, number = {1}, pages = {313--326}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Listgarten, Jennifer; Weinstein, Michael M; Kleinstiver, Benjamin P; Sousa, Alexander A; Joung, Keith J; Crawford, Jake; Gao, Kevin; Hoang, Luong; Elibol, Melih; Doench, John G; others, Prediction of off-target activities for the end-to-end design of CRISPR guide RNAs Journal Article Nature Biomedical Engineering, 2 (1), pp. 38, 2018. @article{listgarten2018prediction, title = {Prediction of off-target activities for the end-to-end design of CRISPR guide RNAs}, author = {Jennifer Listgarten and Michael M Weinstein and Benjamin P Kleinstiver and Alexander A Sousa and Keith J Joung and Jake Crawford and Kevin Gao and Luong Hoang and Melih Elibol and John G Doench and others}, url = {https://doi.org/10.1038/s41551-017-0178-6}, doi = {10.1038/s41551-017-0178-6}, year = {2018}, date = {2018-01-01}, journal = {Nature Biomedical Engineering}, volume = {2}, number = {1}, pages = {38}, publisher = {Nature Publishing Group}, keywords = {CRISPR}, pubstate = {published}, tppubtype = {article} } |
Shi, Baochen; Leung, Donald YM; Taylor, Patricia A; Li, Huiying Methicillin-Resistant Staphylococcus aureus Colonization Is Associated with Decreased Skin Commensal Bacteria in Atopic Dermatitis. Journal Article The Journal of investigative dermatology, 2018. Links | BibTeX | Tags: bacteria @article{shi2018methicillin, title = {Methicillin-Resistant Staphylococcus aureus Colonization Is Associated with Decreased Skin Commensal Bacteria in Atopic Dermatitis.}, author = {Baochen Shi and Donald YM Leung and Patricia A Taylor and Huiying Li}, url = {https://doi.org/10.1016/j.jid.2018.01.022}, doi = {10.1016/j.jid.2018.01.022}, year = {2018}, date = {2018-01-01}, journal = {The Journal of investigative dermatology}, keywords = {bacteria}, pubstate = {published}, tppubtype = {article} } |
Fraser, Devaughn; Mouton, Alice; Serieys, Laurel EK; Cole, Steve; Carver, Scott; Vandewoude, Sue; Lappin, Michael; Riley, Seth PD; Wayne, Robert Genome-wide expression reveals multiple systemic effects associated with detection of anticoagulant poisons in bobcats (Lynx rufus) Journal Article Molecular ecology, 27 (5), pp. 1170–1187, 2018. @article{fraser2018genome, title = {Genome-wide expression reveals multiple systemic effects associated with detection of anticoagulant poisons in bobcats (Lynx rufus)}, author = {Devaughn Fraser and Alice Mouton and Laurel EK Serieys and Steve Cole and Scott Carver and Sue Vandewoude and Michael Lappin and Seth PD Riley and Robert Wayne}, url = {https://doi.org/10.1111/mec.14531}, doi = {10.1111/mec.14531}, year = {2018}, date = {2018-01-01}, journal = {Molecular ecology}, volume = {27}, number = {5}, pages = {1170--1187}, publisher = {Wiley Online Library}, keywords = {GWAS}, pubstate = {published}, tppubtype = {article} } |
Ziyad, Safiyyah; Riordan, Jesse D; Cavanaugh, Ann M; Su, Trent; Hernandez, Gloria E; Hilfenhaus, Georg; Morselli, Marco; Huynh, Kristine; Wang, Kevin; Chen, Jau-Nian; others, A Forward Genetic Screen Targeting the Endothelium Reveals a Regulatory Role for the Lipid Kinase Pi4ka in Myelo-and Erythropoiesis Journal Article Cell reports, 22 (5), pp. 1211–1224, 2018. Links | BibTeX | Tags: cancer, gene mutation, leukemia, RNA-seq @article{ziyad2018forward, title = {A Forward Genetic Screen Targeting the Endothelium Reveals a Regulatory Role for the Lipid Kinase Pi4ka in Myelo-and Erythropoiesis}, author = {Safiyyah Ziyad and Jesse D Riordan and Ann M Cavanaugh and Trent Su and Gloria E Hernandez and Georg Hilfenhaus and Marco Morselli and Kristine Huynh and Kevin Wang and Jau-Nian Chen and others}, url = {https://doi.org/10.1016/j.celrep.2018.01.017}, doi = {10.1016/j.celrep.2018.01.017}, year = {2018}, date = {2018-01-01}, journal = {Cell reports}, volume = {22}, number = {5}, pages = {1211--1224}, publisher = {Elsevier}, keywords = {cancer, gene mutation, leukemia, RNA-seq}, pubstate = {published}, tppubtype = {article} } |
Camacho, Jessica; Truong, Lisa; Kurt, Zeyneb; Chen, Yen-Wei; Morselli, Marco; Gutierrez, Gerardo; Pellegrini, Matteo; Yang, Xia; Allard, Patrick The Memory of Environmental Chemical Exposure in C. elegans Is Dependent on the Jumonji Demethylases jmjd-2 and jmjd-3/utx-1 Journal Article Cell reports, 23 (8), pp. 2392–2404, 2018. @article{camacho2018memory, title = {The Memory of Environmental Chemical Exposure in C. elegans Is Dependent on the Jumonji Demethylases jmjd-2 and jmjd-3/utx-1}, author = {Jessica Camacho and Lisa Truong and Zeyneb Kurt and Yen-Wei Chen and Marco Morselli and Gerardo Gutierrez and Matteo Pellegrini and Xia Yang and Patrick Allard}, url = {https://doi.org/10.1016/j.celrep.2018.04.078}, doi = {10.1016/j.celrep.2018.04.078}, year = {2018}, date = {2018-01-01}, journal = {Cell reports}, volume = {23}, number = {8}, pages = {2392--2404}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Ko, Albert; Venkatesan, Natarajan; Chatoff, Jenna; Morselli, Marco; Fishbein, Gregory; Bomont, Pascale; Pellegrini, Matteo; Wang, Marilene; Srivatsan, Eri GAN gene exon 8 SNP is related to gigaxonin expression and increased expression of e-cadherin in head and neck cancer Miscellaneous 2018. @misc{ko2018gan, title = {GAN gene exon 8 SNP is related to gigaxonin expression and increased expression of e-cadherin in head and neck cancer}, author = {Albert Ko and Natarajan Venkatesan and Jenna Chatoff and Marco Morselli and Gregory Fishbein and Pascale Bomont and Matteo Pellegrini and Marilene Wang and Eri Srivatsan}, url = {https://doi.org/10.1158/1538-7445.AM2018-5505}, doi = {10.1158/1538-7445.AM2018-5505}, year = {2018}, date = {2018-01-01}, publisher = {AACR}, keywords = {}, pubstate = {published}, tppubtype = {misc} } |
Khalid, Aysha B; Slayden, Alexandria V; Kumpati, Jerusha; Perry, Chanel D; Berryhill, Stuart B; Crawford, Julie A; Fatima, Iram; Morselli, Marco; Pellegrini, Matteo; Miranda-Carboni, Gustavo A; others, GATA4 represses RANKL via multiple long-range enhancers to regulate osteoclast differentiation Journal Article Bone, 2018. @article{khalid2018gata4, title = {GATA4 represses RANKL via multiple long-range enhancers to regulate osteoclast differentiation}, author = {Aysha B Khalid and Alexandria V Slayden and Jerusha Kumpati and Chanel D Perry and Stuart B Berryhill and Julie A Crawford and Iram Fatima and Marco Morselli and Matteo Pellegrini and Gustavo A Miranda-Carboni and others}, url = {https://doi.org/10.1016/j.bone.2018.07.014}, doi = {10.1016/j.bone.2018.07.014}, year = {2018}, date = {2018-01-01}, journal = {Bone}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Borgognone, Alessandra; Castanera, Raul; Morselli, Marco; López-Varas, Leticia; Rubbi, Liudmilla; Pisabarro, Antonio G; Pellegrini, Matteo; Ramirez, Lucia Transposon-associated epigenetic silencing during Pleurotus ostreatus life cycle Journal Article DNA Research, 2018. @article{borgognone2018transposon, title = {Transposon-associated epigenetic silencing during Pleurotus ostreatus life cycle}, author = {Alessandra Borgognone and Raul Castanera and Marco Morselli and Leticia López-Varas and Liudmilla Rubbi and Antonio G Pisabarro and Matteo Pellegrini and Lucia Ramirez}, url = {https://doi.org/10.1093/dnares/dsy016}, doi = {10.1093/dnares/dsy016}, year = {2018}, date = {2018-01-01}, journal = {DNA Research}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Mitchell, Simon; Roy, Koushik; Zangle, Thomas A; Hoffmann, Alexander Nongenetic origins of cell-to-cell variability in B lymphocyte proliferation Journal Article Proceedings of the National Academy of Sciences, 115 (12), pp. E2888–E2897, 2018. @article{mitchell2018nongenetic, title = {Nongenetic origins of cell-to-cell variability in B lymphocyte proliferation}, author = {Simon Mitchell and Koushik Roy and Thomas A Zangle and Alexander Hoffmann}, url = {https://doi.org/10.1073/pnas.1715639115}, doi = {10.1073/pnas.1715639115}, year = {2018}, date = {2018-01-01}, journal = {Proceedings of the National Academy of Sciences}, volume = {115}, number = {12}, pages = {E2888--E2897}, publisher = {National Acad Sciences}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Roy, Koushik; Shokhirev, Maxim Nikolaievich; Mitchell, Simon; Hoffmann, Alexander Deriving Quantitative Cell Biological Information from Dye-Dilution Lymphocyte Proliferation Experiments Incollection B Cell Receptor Signaling, pp. 81–94, Springer, 2018. @incollection{roy2018deriving, title = {Deriving Quantitative Cell Biological Information from Dye-Dilution Lymphocyte Proliferation Experiments}, author = {Koushik Roy and Maxim Nikolaievich Shokhirev and Simon Mitchell and Alexander Hoffmann}, url = {https://doi.org/10.1007/978-1-4939-7474-0_6}, doi = {10.1007/978-1-4939-7474-0_6}, year = {2018}, date = {2018-01-01}, booktitle = {B Cell Receptor Signaling}, pages = {81--94}, publisher = {Springer}, keywords = {}, pubstate = {published}, tppubtype = {incollection} } |
Gangalum, Rajendra K; Kim, Dongjae; Kashyap, Raj K; Mangul, Serghei; Zhou, Xinkai; Elashoff, David; Bhat, Suraj Spatial Analysis of Single Fiber Cells of the Developing Ocular Lens Reveals Regulated Heterogeneity of Gene Expression Journal Article Available at SSRN 3205412, 2018. @article{gangalum2018spatial, title = {Spatial Analysis of Single Fiber Cells of the Developing Ocular Lens Reveals Regulated Heterogeneity of Gene Expression}, author = {Rajendra K Gangalum and Dongjae Kim and Raj K Kashyap and Serghei Mangul and Xinkai Zhou and David Elashoff and Suraj Bhat}, url = {http://dx.doi.org/10.2139/ssrn.3205412}, doi = {10.2139/ssrn.3205412}, year = {2018}, date = {2018-01-01}, journal = {Available at SSRN 3205412}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Mangul, Serghei; Martin, Lana S; Eskin, Eleazar Involving undergraduates in genomics research to narrow the education--research gap Journal Article Nature biotechnology, 36 (4), pp. 369, 2018. Links | BibTeX | Tags: education, training @article{mangul2018involving, title = {Involving undergraduates in genomics research to narrow the education--research gap}, author = {Serghei Mangul and Lana S Martin and Eleazar Eskin}, url = {https://doi.org/10.1038/nbt.4113}, doi = {10.1038/nbt.4113}, year = {2018}, date = {2018-01-01}, journal = {Nature biotechnology}, volume = {36}, number = {4}, pages = {369}, publisher = {Nature Publishing Group}, keywords = {education, training}, pubstate = {published}, tppubtype = {article} } |
Lay, Fides D; Kelly, Theresa K; Jones, Peter A Nucleosome Occupancy and Methylome Sequencing (NOMe-seq) Incollection DNA Methylation Protocols, pp. 267–284, Springer, 2018. @incollection{lay2018nucleosome, title = {Nucleosome Occupancy and Methylome Sequencing (NOMe-seq)}, author = {Fides D Lay and Theresa K Kelly and Peter A Jones}, url = {10.1007/978-1-4939-7481-8_14}, doi = {https://doi.org/10.1007/978-1-4939-7481-8_14}, year = {2018}, date = {2018-01-01}, booktitle = {DNA Methylation Protocols}, pages = {267--284}, publisher = {Springer}, keywords = {}, pubstate = {published}, tppubtype = {incollection} } |
Miao, Jianwei; Pryor, Alan; Yang, Yongsoo; Rana, Arjun; Gallagher-Jones, Marcus; Zhou, Jihan; Lo, Yuan Hung; Rodriguez, Jose A; Chiu, Wah GENFIRE: from Precisely Localizing Single Atoms in Materials to High Resolution 3D Imaging of Cellular Structures Journal Article Microscopy and Microanalysis, 24 (S1), pp. 1446–1447, 2018. @article{miao2018genfire, title = {GENFIRE: from Precisely Localizing Single Atoms in Materials to High Resolution 3D Imaging of Cellular Structures}, author = {Jianwei Miao and Alan Pryor and Yongsoo Yang and Arjun Rana and Marcus Gallagher-Jones and Jihan Zhou and Yuan Hung Lo and Jose A Rodriguez and Wah Chiu}, url = {https://doi.org/10.1017/S1431927618007717}, doi = {10.1017/S1431927618007717}, year = {2018}, date = {2018-01-01}, journal = {Microscopy and Microanalysis}, volume = {24}, number = {S1}, pages = {1446--1447}, publisher = {Cambridge University Press}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Pryor, Alan; Rana, Arjun; Xu, Rui; Rodriguez, Jose A; Yang, Yongsoo; Gallagher-Jones, Marcus; Jiang, Huaidong; Kanhaiya, Krishan; Nathanson, Michael; Park, Jae Hyun; others, Single-shot 3D coherent diffractive imaging of core-shell nanoparticles with elemental specificity Journal Article Scientific reports, 8 (1), pp. 8284, 2018. @article{pryor2018single, title = {Single-shot 3D coherent diffractive imaging of core-shell nanoparticles with elemental specificity}, author = {Alan Pryor and Arjun Rana and Rui Xu and Jose A Rodriguez and Yongsoo Yang and Marcus Gallagher-Jones and Huaidong Jiang and Krishan Kanhaiya and Michael Nathanson and Jae Hyun Park and others}, url = {https://doi.org/10.1038/s41598-018-26182-1}, doi = {10.1038/s41598-018-26182-1}, year = {2018}, date = {2018-01-01}, journal = {Scientific reports}, volume = {8}, number = {1}, pages = {8284}, publisher = {Nature Publishing Group}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Lo, Yuan Hung; Zhao, Lingrong; Gallagher-Jones, Marcus; Rana, Arjun; Lodico, Jared; Xiao, Weikun; Regan, BC; Miao, Jianwei In situ coherent diffractive imaging Journal Article Nature communications, 9 (1), pp. 1826, 2018. @article{lo2018situ, title = {In situ coherent diffractive imaging}, author = {Yuan Hung Lo and Lingrong Zhao and Marcus Gallagher-Jones and Arjun Rana and Jared Lodico and Weikun Xiao and BC Regan and Jianwei Miao}, url = {https://doi.org/10.1038/s41467-018-04259-9s}, doi = {10.1038/s41467-018-04259-9}, year = {2018}, date = {2018-01-01}, journal = {Nature communications}, volume = {9}, number = {1}, pages = {1826}, publisher = {Nature Publishing Group}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Park, Shuin; Ranjbarvazirj, Sara; Lay, Fides D; Zhao, Peng; Miller, Mark J; Dhaliwal, Jasmeet S; Huertas-Vazquez, Adriana; Wu, Xiuju; Qiao, Rong; Soffer, Justin M; others, Genetic Regulation of Fibroblast Activation and Proliferation in Cardiac Fibrosis Journal Article Circulation, pp. CIRCULATIONAHA–118, 2018. @article{park2018genetic, title = {Genetic Regulation of Fibroblast Activation and Proliferation in Cardiac Fibrosis}, author = {Shuin Park and Sara Ranjbarvazirj and Fides D Lay and Peng Zhao and Mark J Miller and Jasmeet S Dhaliwal and Adriana Huertas-Vazquez and Xiuju Wu and Rong Qiao and Justin M Soffer and others}, url = {https://doi.org/10.1161/CIRCULATIONAHA.118.035420}, doi = {10.1161/CIRCULATIONAHA.118.035420}, year = {2018}, date = {2018-01-01}, journal = {Circulation}, pages = {CIRCULATIONAHA--118}, publisher = {Am Heart Assoc}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Cheng, Lucy; Marinelli, Laura J; Grosset, Noel; Fitz-Gibbon, Sorel T; Bowman, Charles A; Dang, Brian Q; Russell, Daniel A; Jacobs-Sera, Deborah; Shi, Baochen; Pellegrini, Matteo; others, BMC microbiology, 18 (1), pp. 19, 2018. Links | BibTeX | Tags: bacteria @article{cheng2018complete, title = {Complete genomic sequences of Propionibacterium freudenreichii phages from Swiss cheese reveal greater diversity than Cutibacterium (formerly Propionibacterium) acnes phages}, author = {Lucy Cheng and Laura J Marinelli and Noel Grosset and Sorel T Fitz-Gibbon and Charles A Bowman and Brian Q Dang and Daniel A Russell and Deborah Jacobs-Sera and Baochen Shi and Matteo Pellegrini and others}, url = {https://doi.org/10.1186/s12866-018-1159-y}, doi = {10.1186/s12866-018-1159-y}, year = {2018}, date = {2018-01-01}, journal = {BMC microbiology}, volume = {18}, number = {1}, pages = {19}, publisher = {BioMed Central}, keywords = {bacteria}, pubstate = {published}, tppubtype = {article} } |
Vaughn, Don A; van Deen, Welmoed K; Kerr, Wesley T; Meyer, Travis R; Bertozzi, Andrea L; Hommes, Daniel W; Cohen, Mark Steven Using insurance claims to predict and improve hospitalizations and biologics use in members with inflammatory bowel diseases Journal Article Journal of biomedical informatics, 81 , pp. 93–101, 2018. @article{vaughn2018using, title = {Using insurance claims to predict and improve hospitalizations and biologics use in members with inflammatory bowel diseases}, author = {Don A Vaughn and Welmoed K van Deen and Wesley T Kerr and Travis R Meyer and Andrea L Bertozzi and Daniel W Hommes and Mark Steven Cohen}, url = {https://doi.org/10.1016/j.jbi.2018.03.015}, doi = {10.1016/j.jbi.2018.03.015}, year = {2018}, date = {2018-01-01}, journal = {Journal of biomedical informatics}, volume = {81}, pages = {93--101}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Loohuis, Loes Olde M; Mangul, Serghei; Ori, Anil PS; Jospin, Guillaume; Koslicki, David; Yang, Harry Taegyun; Wu, Timothy; Boks, Marco P; Lomen-Hoerth, Catherine; Wiedau-Pazos, Martina; others, Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia Journal Article Translational psychiatry, 8 (1), pp. 96, 2018. @article{loohuis2018transcriptome, title = {Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia}, author = {Loes Olde M Loohuis and Serghei Mangul and Anil PS Ori and Guillaume Jospin and David Koslicki and Harry Taegyun Yang and Timothy Wu and Marco P Boks and Catherine Lomen-Hoerth and Martina Wiedau-Pazos and others}, url = {https://doi.org/10.1038/s41398-018-0107-9}, doi = {10.1038/s41398-018-0107-9}, year = {2018}, date = {2018-01-01}, journal = {Translational psychiatry}, volume = {8}, number = {1}, pages = {96}, publisher = {Nature Publishing Group}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Mangul, Serghei; Yang, Harry Taegyun; Strauli, Nicolas; Gruhl, Franziska; Porath, Hagit T; Hsieh, Kevin; Chen, Linus; Daley, Timothy; Christenson, Stephanie; Wesolowska-Andersen, Agata; others, ROP: Dumpster Diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues Journal Article Genome biology, 19 (1), pp. 36, 2018. @article{mangul2018rop, title = {ROP: Dumpster Diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues}, author = {Serghei Mangul and Harry Taegyun Yang and Nicolas Strauli and Franziska Gruhl and Hagit T Porath and Kevin Hsieh and Linus Chen and Timothy Daley and Stephanie Christenson and Agata Wesolowska-Andersen and others}, url = {https://doi.org/10.1186/s13059-018-1403-7}, doi = {10.1186/s13059-018-1403-7}, year = {2018}, date = {2018-01-01}, journal = {Genome biology}, volume = {19}, number = {1}, pages = {36}, publisher = {BioMed Central}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Vaughn, Don A; Savjani, Ricky R; Cohen, Mark Steven; Eagleman, David M Empathic neural responses predict group allegiance Journal Article Frontiers in Human Neuroscience, 12 , pp. 302, 2018. @article{vaughn2018empathic, title = {Empathic neural responses predict group allegiance}, author = {Don A Vaughn and Ricky R Savjani and Mark Steven Cohen and David M Eagleman}, url = {https://doi.org/10.3389/fnhum.2018.00302}, doi = {10.3389/fnhum.2018.00302}, year = {2018}, date = {2018-01-01}, journal = {Frontiers in Human Neuroscience}, volume = {12}, pages = {302}, publisher = {Frontiers}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Shirali, Aditya S; Romay, Milagros C; McDonald, Austin I; Su, Trent; Steel, Michelle E; Iruela-Arispe, Luisa M A multi-step transcriptional cascade underlies vascular regeneration in vivo Journal Article Scientific reports, 8 (1), pp. 5430, 2018. Links | BibTeX | Tags: endothelial growth, Galaxy, gene expression, RNA-seq, wound repair @article{shirali2018multi, title = {A multi-step transcriptional cascade underlies vascular regeneration in vivo}, author = {Aditya S Shirali and Milagros C Romay and Austin I McDonald and Trent Su and Michelle E Steel and Luisa M Iruela-Arispe}, url = {https://doi.org/10.1038/s41598-018-23653-3}, doi = {10.1038/s41598-018-23653-3}, year = {2018}, date = {2018-01-01}, journal = {Scientific reports}, volume = {8}, number = {1}, pages = {5430}, publisher = {Nature Publishing Group}, keywords = {endothelial growth, Galaxy, gene expression, RNA-seq, wound repair}, pubstate = {published}, tppubtype = {article} } |
Gallagher-Jones, Marcus; Glynn, Calina; Boyer, David R; Martynowycz, Michael W; Hernandez, Evelyn; Miao, Jennifer; Zee, Chih-Te; Novikova, Irina V; Goldschmidt, Lukasz; McFarlane, Heather T; others, Sub-ångström cryo-EM structure of a prion protofibril reveals a polar clasp Journal Article Nature structural & molecular biology, 25 (2), pp. 131, 2018. @article{gallagher2018sub, title = {Sub-ångström cryo-EM structure of a prion protofibril reveals a polar clasp}, author = {Marcus Gallagher-Jones and Calina Glynn and David R Boyer and Michael W Martynowycz and Evelyn Hernandez and Jennifer Miao and Chih-Te Zee and Irina V Novikova and Lukasz Goldschmidt and Heather T McFarlane and others}, url = {https://doi.org/10.1038/s41594-017-0018-0}, doi = {10.1038/s41594-017-0018-0}, year = {2018}, date = {2018-01-01}, journal = {Nature structural & molecular biology}, volume = {25}, number = {2}, pages = {131}, publisher = {Nature Publishing Group}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Buckner, Janet C; Ellingson, Ryan; Gold, David A; Jones, Terry L; Jacobs, David K Molecular phylogenetics and evolution, 122 , pp. 102–109, 2018. @article{buckner2018mitogenomics, title = {Mitogenomics supports an unexpected taxonomic relationship for the extinct diving duck Chendytes lawi and definitively places the extinct Labrador Duck}, author = {Janet C Buckner and Ryan Ellingson and David A Gold and Terry L Jones and David K Jacobs}, url = {https://doi.org/10.1016/j.ympev.2017.12.008}, doi = {10.1016/j.ympev.2017.12.008}, year = {2018}, date = {2018-01-01}, journal = {Molecular phylogenetics and evolution}, volume = {122}, pages = {102--109}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Hattne, Johan; Shi, Dan; Glynn, Calina; Zee, Chih-Te; Gallagher-Jones, Marcus; Martynowycz, Michael W; Rodriguez, Jose A; Gonen, Tamir Analysis of global and site-specific radiation damage in cryo-EM Journal Article Structure, 26 (5), pp. 759–766, 2018. @article{hattne2018analysis, title = {Analysis of global and site-specific radiation damage in cryo-EM}, author = {Johan Hattne and Dan Shi and Calina Glynn and Chih-Te Zee and Marcus Gallagher-Jones and Michael W Martynowycz and Jose A Rodriguez and Tamir Gonen}, url = {https://doi.org/10.1016/j.str.2018.03.021}, doi = {10.1016/j.str.2018.03.021}, year = {2018}, date = {2018-01-01}, journal = {Structure}, volume = {26}, number = {5}, pages = {759--766}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
McDonald, Austin I; Shirali, Aditya S; Aragón, Raquel L; Ma, Feiyang; Hernandez, Gloria E; Vaughn, Don A; Mack, Julia J; Lim, Tiffany Y; Sunshine, Hannah; Zhao, Peng; others, Endothelial regeneration of large vessels is a biphasic process driven by local cells with distinct proliferative capacities Journal Article Cell stem cell, 23 (2), pp. 210–225, 2018. @article{mcdonald2018endothelial, title = {Endothelial regeneration of large vessels is a biphasic process driven by local cells with distinct proliferative capacities}, author = {Austin I McDonald and Aditya S Shirali and Raquel L Aragón and Feiyang Ma and Gloria E Hernandez and Don A Vaughn and Julia J Mack and Tiffany Y Lim and Hannah Sunshine and Peng Zhao and others}, url = {https://doi.org/10.1016/j.stem.2018.07.011}, doi = {10.1016/j.stem.2018.07.011}, year = {2018}, date = {2018-01-01}, journal = {Cell stem cell}, volume = {23}, number = {2}, pages = {210--225}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Merkurjev, Daria; Hong, Wan-Ting; Iida, Kei; Oomoto, Ikumi; Goldie, Belinda J; Yamaguti, Hitoshi; Ohara, Takayuki; Kawaguchi, Shin-ya; Hirano, Tomoo; Martin, Kelsey C; others, Synaptic N 6-methyladenosine (m 6 A) epitranscriptome reveals functional partitioning of localized transcripts Journal Article Nature neuroscience, pp. 1, 2018. @article{merkurjev2018synaptic, title = {Synaptic N 6-methyladenosine (m 6 A) epitranscriptome reveals functional partitioning of localized transcripts}, author = {Daria Merkurjev and Wan-Ting Hong and Kei Iida and Ikumi Oomoto and Belinda J Goldie and Hitoshi Yamaguti and Takayuki Ohara and Shin-ya Kawaguchi and Tomoo Hirano and Kelsey C Martin and others}, url = {https://doi.org/10.1038/s41593-018-0173-6}, doi = {10.1038/s41593-018-0173-6}, year = {2018}, date = {2018-01-01}, journal = {Nature neuroscience}, pages = {1}, publisher = {Nature Publishing Group}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Gallaher, Sean D; Fitz-Gibbon, Sorel T; Strenkert, Daniela; Purvine, Samuel O; Pellegrini, Matteo; Merchant, Sabeeha S The Plant Journal, 93 (3), pp. 545–565, 2018. @article{gallaher2018high, title = {High-throughput sequencing of the chloroplast and mitochondrion of Chlamydomonas reinhardtii to generate improved de novo assemblies, analyze expression patterns and transcript speciation, and evaluate diversity among laboratory strains and wild isolates}, author = {Sean D Gallaher and Sorel T Fitz-Gibbon and Daniela Strenkert and Samuel O Purvine and Matteo Pellegrini and Sabeeha S Merchant}, url = {https://doi.org/10.1111/tpj.13788}, doi = {10.1111/tpj.13788}, year = {2018}, date = {2018-01-01}, journal = {The Plant Journal}, volume = {93}, number = {3}, pages = {545--565}, publisher = {Wiley Online Library}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Kuo, Caroline Y; Long, Joseph D; Campo-Fernandez, Beatriz; de Oliveira, Satiro; Cooper, Aaron R; Romero, Zulema; Hoban, Megan D; Joglekar, Alok V; Lill, Georgia R; Kaufman, Michael L; others, Site-Specific Gene Editing of Human Hematopoietic Stem Cells for X-Linked Hyper-IgM Syndrome Journal Article Cell reports, 23 (9), pp. 2606–2616, 2018. @article{kuo2018site, title = {Site-Specific Gene Editing of Human Hematopoietic Stem Cells for X-Linked Hyper-IgM Syndrome}, author = {Caroline Y Kuo and Joseph D Long and Beatriz Campo-Fernandez and Satiro de Oliveira and Aaron R Cooper and Zulema Romero and Megan D Hoban and Alok V Joglekar and Georgia R Lill and Michael L Kaufman and others}, url = {https://doi.org/10.1016/j.celrep.2018.04.103}, doi = {10.1016/j.celrep.2018.04.103}, year = {2018}, date = {2018-01-01}, journal = {Cell reports}, volume = {23}, number = {9}, pages = {2606--2616}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Gusev, Alexander; Mancuso, Nicholas; Won, Hyejung; Kousi, Maria; Finucane, Hilary K; Reshef, Yakir; Song, Lingyun; Safi, Alexias; McCarroll, Steven; Neale, Benjamin M; others, Transcriptome-wide association study of schizophrenia and chromatin activity yields mechanistic disease insights Journal Article Nature genetics, 50 (4), pp. 538, 2018. @article{gusev2018transcriptome, title = {Transcriptome-wide association study of schizophrenia and chromatin activity yields mechanistic disease insights}, author = {Alexander Gusev and Nicholas Mancuso and Hyejung Won and Maria Kousi and Hilary K Finucane and Yakir Reshef and Lingyun Song and Alexias Safi and Steven McCarroll and Benjamin M Neale and others}, url = {https://doi.org/10.1038/s41588-018-0092-1}, doi = {10.1038/s41588-018-0092-1}, year = {2018}, date = {2018-01-01}, journal = {Nature genetics}, volume = {50}, number = {4}, pages = {538}, publisher = {Nature Publishing Group}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Fejzo, Marlena S; Sazonova, Olga V; Sathirapongsasuti, Fah J; Hallgr'imsdóttir, Ingileif B; Vacic, Vladimir; MacGibbon, Kimber W; Schoenberg, Frederic P; Mancuso, Nicholas; Slamon, Dennis J; Mullin, Patrick M Placenta and appetite genes GDF15 and IGFBP7 are associated with hyperemesis gravidarum Journal Article Nature communications, 9 (1), pp. 1178, 2018. @article{fejzo2018placenta, title = {Placenta and appetite genes GDF15 and IGFBP7 are associated with hyperemesis gravidarum}, author = {Marlena S Fejzo and Olga V Sazonova and Fah J Sathirapongsasuti and Ingileif B Hallgr'imsdóttir and Vladimir Vacic and Kimber W MacGibbon and Frederic P Schoenberg and Nicholas Mancuso and Dennis J Slamon and Patrick M Mullin}, url = {https://doi.org/10.1038/s41467-018-03258-0}, doi = {10.1038/s41467-018-03258-0}, year = {2018}, date = {2018-01-01}, journal = {Nature communications}, volume = {9}, number = {1}, pages = {1178}, publisher = {Nature Publishing Group}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Garrett, Matthew; Sperry, Jantzen; Braas, Daniel; Yan, Weihong; Le, Thuc M; Mottahedeh, Jack; Ludwig, Kirsten; Eskin, Ascia; Qin, Yue; Levy, Rachelle; others, Metabolic characterization of isocitrate dehydrogenase (IDH) mutant and IDH wildtype gliomaspheres uncovers cell type-specific vulnerabilities Journal Article Cancer & metabolism, 6 (1), pp. 4, 2018. @article{garrett2018metabolic, title = {Metabolic characterization of isocitrate dehydrogenase (IDH) mutant and IDH wildtype gliomaspheres uncovers cell type-specific vulnerabilities}, author = {Matthew Garrett and Jantzen Sperry and Daniel Braas and Weihong Yan and Thuc M Le and Jack Mottahedeh and Kirsten Ludwig and Ascia Eskin and Yue Qin and Rachelle Levy and others}, url = {https://doi.org/10.1186/s40170-018-0177-4}, doi = {10.1186/s40170-018-0177-4}, year = {2018}, date = {2018-01-01}, journal = {Cancer & metabolism}, volume = {6}, number = {1}, pages = {4}, publisher = {BioMed Central}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Feusner, Jamie D; Kerr, Wesley T; Moody, Teena D; Zhang, Aifeng F; Cohen, Mark S; Leow, Alex D; Strober, Michael A; Vaughn, Don A Graphs in Biomedical Image Analysis and Integrating Medical Imaging and Non-Imaging Modalities, pp. 92–99, Springer, 2018. @incollection{feusner2018cross, title = {Cross-diagnostic Prediction of Dimensional Psychiatric Phenotypes in Anorexia Nervosa and Body Dysmorphic Disorder Using Multimodal Neuroimaging and Psychometric Data}, author = {Jamie D Feusner and Wesley T Kerr and Teena D Moody and Aifeng F Zhang and Mark S Cohen and Alex D Leow and Michael A Strober and Don A Vaughn}, url = {https://doi.org/10.1007/978-3-030-00689-1_10}, doi = {10.1007/978-3-030-00689-1_10}, year = {2018}, date = {2018-01-01}, booktitle = {Graphs in Biomedical Image Analysis and Integrating Medical Imaging and Non-Imaging Modalities}, pages = {92--99}, publisher = {Springer}, keywords = {}, pubstate = {published}, tppubtype = {incollection} } |
McDonald, Austin I; Shirali, Aditya S; Aragón, Raquel; Ma, Feiyang; Hernandez, Gloria; Vaughn, Don A; Mack, Julia J; Lim, Tiffany Y; Sunshine, Hannah; Zhao, Peng; others, Endothelial regeneration of large vessels is a biphasic process driven by local cells with distinct proliferative capacities Journal Article Cell stem cell, 23 (2), pp. 210–225, 2018. @article{mcdonald2018endothelialb, title = {Endothelial regeneration of large vessels is a biphasic process driven by local cells with distinct proliferative capacities}, author = {Austin I McDonald and Aditya S Shirali and Raquel Aragón and Feiyang Ma and Gloria Hernandez and Don A Vaughn and Julia J Mack and Tiffany Y Lim and Hannah Sunshine and Peng Zhao and others}, url = {https://doi.org/10.1016/j.stem.2018.07.011}, doi = {10.1016/j.stem.2018.07.011}, year = {2018}, date = {2018-01-01}, journal = {Cell stem cell}, volume = {23}, number = {2}, pages = {210--225}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Yeom, Kyu-Hyeon; Mitchell, Simon; Linares, Anthony J; Zheng, Sika; Lin, Chia-Ho; Wang, Xiao-Jun; Hoffmann, Alexander; Black, Douglas L Polypyrimidine Tract Binding Protein blocks microRNA-124 biogenesis to enforce its neuronal specific expression. Journal Article bioRxiv, pp. 297515, 2018. @article{yeom2018polypyrimidine, title = {Polypyrimidine Tract Binding Protein blocks microRNA-124 biogenesis to enforce its neuronal specific expression.}, author = {Kyu-Hyeon Yeom and Simon Mitchell and Anthony J Linares and Sika Zheng and Chia-Ho Lin and Xiao-Jun Wang and Alexander Hoffmann and Douglas L Black}, url = {https://doi.org/10.1073/pnas.1809609115}, doi = {10.1073/pnas.1809609115}, year = {2018}, date = {2018-01-01}, journal = {bioRxiv}, pages = {297515}, publisher = {Cold Spring Harbor Laboratory}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Yeom, Kyu-Hyeon; Mitchell, Simon; Linares, Anthony J; Zheng, Sika; Lin, Chia-Ho; Wang, Xiao-Jun; Hoffmann, Alexander; Black, Douglas L Polypyrimidine tract-binding protein blocks miRNA-124 biogenesis to enforce its neuronal-specific expression in the mouse Journal Article Proceedings of the National Academy of Sciences, pp. 201809609, 2018. @article{yeom2018polypyrimidineb, title = {Polypyrimidine tract-binding protein blocks miRNA-124 biogenesis to enforce its neuronal-specific expression in the mouse}, author = {Kyu-Hyeon Yeom and Simon Mitchell and Anthony J Linares and Sika Zheng and Chia-Ho Lin and Xiao-Jun Wang and Alexander Hoffmann and Douglas L Black}, url = {https://doi.org/10.1073/pnas.1809609115}, doi = {10.1073/pnas.1809609115}, year = {2018}, date = {2018-01-01}, journal = {Proceedings of the National Academy of Sciences}, pages = {201809609}, publisher = {National Acad Sciences}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
2017 |
Wu, Ye Emily; Pan, Lin; Zuo, Yanning; Li, Xinmin; Hong, Weizhe Detecting activated cell populations using single-cell RNA-seq Journal Article Neuron, 96 (2), pp. 313–329, 2017. @article{wu2017detecting, title = {Detecting activated cell populations using single-cell RNA-seq}, author = {Ye Emily Wu and Lin Pan and Yanning Zuo and Xinmin Li and Weizhe Hong}, url = {https://doi.org/10.1016/j.neuron.2017.09.026}, doi = {10.1016/j.neuron.2017.09.026}, year = {2017}, date = {2017-01-01}, journal = {Neuron}, volume = {96}, number = {2}, pages = {313--329}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Xue, Yong; Pradhan, Suman K; Sun, Fei; Chronis, Constantinos; Tran, Nancy; Su, Trent; Van, Christopher; Vashisht, Ajay A; Wohlschlegel, James; Peterson, Craig L; others, Mot1, Ino80C, and NC2 function coordinately to regulate pervasive transcription in yeast and mammals Journal Article Molecular cell, 67 (4), pp. 594–607, 2017. @article{xue2017mot1, title = {Mot1, Ino80C, and NC2 function coordinately to regulate pervasive transcription in yeast and mammals}, author = {Yong Xue and Suman K Pradhan and Fei Sun and Constantinos Chronis and Nancy Tran and Trent Su and Christopher Van and Ajay A Vashisht and James Wohlschlegel and Craig L Peterson and others}, url = {https://doi.org/10.1016/j.molcel.2017.06.029}, doi = {10.1016/j.molcel.2017.06.029}, year = {2017}, date = {2017-01-01}, journal = {Molecular cell}, volume = {67}, number = {4}, pages = {594--607}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Olivera-Perez, Henry M; Lam, Larry; Dang, Johnny; Jiang, Weilan; Rodriguez, Fabian; Rigali, Elizabeth; Weitzman, Sarah; Porter, Verna; Rubbi, Liudmilla; Morselli, Marco; others, The FASEB Journal, 31 (10), pp. 4359–4369, 2017. @article{olivera2017omega, title = {Omega-3 fatty acids increase the unfolded protein response and improve amyloid-$beta$ phagocytosis by macrophages of patients with mild cognitive impairment}, author = {Henry M Olivera-Perez and Larry Lam and Johnny Dang and Weilan Jiang and Fabian Rodriguez and Elizabeth Rigali and Sarah Weitzman and Verna Porter and Liudmilla Rubbi and Marco Morselli and others}, url = {https://doi.org/10.1096/fj.201700290R}, doi = {10.1096/fj.201700290R}, year = {2017}, date = {2017-01-01}, journal = {The FASEB Journal}, volume = {31}, number = {10}, pages = {4359--4369}, publisher = {Federation of American Societies for Experimental Biology Bethesda, MD, USA}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Nakano, Haruko; Minami, Itsunari; Braas, Daniel; Pappoe, Herman; Wu, Xiuju; Sagadevan, Addelynn; Vergnes, Laurent; Fu, Kai; Morselli, Marco; Ding, Xueqin; others, Glucose Inhibits Cardiomyocyte Maturation Through Nucleotide Biosynthesis Journal Article Circulation Research, 121 (Suppl_1), pp. A346, 2017. @article{nakano2017glucose, title = {Glucose Inhibits Cardiomyocyte Maturation Through Nucleotide Biosynthesis}, author = {Haruko Nakano and Itsunari Minami and Daniel Braas and Herman Pappoe and Xiuju Wu and Addelynn Sagadevan and Laurent Vergnes and Kai Fu and Marco Morselli and Xueqin Ding and others}, url = {https://doi.org/10.7554/eLife.29330}, doi = {10.7554/eLife.29330}, year = {2017}, date = {2017-01-01}, journal = {Circulation Research}, volume = {121}, number = {Suppl_1}, pages = {A346}, publisher = {Circulation Research}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Saha, Ashis; Kim, Yungil; Gewirtz, Ariel DH; Jo, Brian; Gao, Chuan; McDowell, Ian C; Engelhardt, Barbara E; Battle, Alexis; ç, Fran; Ardlie, Kristin G; others, Co-expression networks reveal the tissue-specific regulation of transcription and splicing Journal Article Genome research, 2017. @article{saha2017co, title = {Co-expression networks reveal the tissue-specific regulation of transcription and splicing}, author = {Ashis Saha and Yungil Kim and Ariel DH Gewirtz and Brian Jo and Chuan Gao and Ian C McDowell and Barbara E Engelhardt and Alexis Battle and Fran{ç}ois Aguet and Kristin G Ardlie and others}, url = {https://doi.org/10.1101/gr.216721.116}, doi = {10.1101/gr.216721.116}, year = {2017}, date = {2017-01-01}, journal = {Genome research}, publisher = {Cold Spring Harbor Lab}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Neben, Cynthia L; Tuzon, Creighton T; Mao, Xiaojing; Lay, Fides D; Merrill, Amy E FGFR2 mutations in bent bone dysplasia syndrome activate nucleolar stress and perturb cell fate determination Journal Article Human molecular genetics, 26 (17), pp. 3253–3270, 2017. @article{neben2017fgfr2, title = {FGFR2 mutations in bent bone dysplasia syndrome activate nucleolar stress and perturb cell fate determination}, author = {Cynthia L Neben and Creighton T Tuzon and Xiaojing Mao and Fides D Lay and Amy E Merrill}, url = {https://doi.org/10.1093/hmg/ddx209}, doi = {10.1093/hmg/ddx209}, year = {2017}, date = {2017-01-01}, journal = {Human molecular genetics}, volume = {26}, number = {17}, pages = {3253--3270}, publisher = {Oxford University Press}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Neben, Cynthia L; Lay, Fides D; Mao, Xiaojing; Tuzon, Creighton T; Merrill, Amy E Ribosome biogenesis is dynamically regulated during osteoblast differentiation Journal Article Gene, 612 , pp. 29–35, 2017. @article{neben2017ribosome, title = {Ribosome biogenesis is dynamically regulated during osteoblast differentiation}, author = {Cynthia L Neben and Fides D Lay and Xiaojing Mao and Creighton T Tuzon and Amy E Merrill}, url = {https://doi.org/10.1016/j.gene.2016.11.010}, doi = {10.1016/j.gene.2016.11.010}, year = {2017}, date = {2017-01-01}, journal = {Gene}, volume = {612}, pages = {29--35}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Helbo, Alexandra Søgaard; Lay, Fides D; Jones, Peter A; Liang, Gangning; æ, Kirsten Grønb Nucleosome positioning and NDR structure at RNA polymerase III promoters Journal Article Scientific reports, 7 , pp. 41947, 2017. @article{helbo2017nucleosome, title = {Nucleosome positioning and NDR structure at RNA polymerase III promoters}, author = {Alexandra Søgaard Helbo and Fides D Lay and Peter A Jones and Gangning Liang and Kirsten Grønb{æ}k}, url = {https://doi.org/10.1038/srep41947}, doi = {10.1038/srep41947}, year = {2017}, date = {2017-01-01}, journal = {Scientific reports}, volume = {7}, pages = {41947}, publisher = {Nature Publishing Group}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Luo, Zhifei; Rhie, Suhn Kyong; Lay, Fides D; Farnham, Peggy J A prostate cancer risk element functions as a repressive loop that regulates HOXA13 Journal Article Cell reports, 21 (6), pp. 1411–1417, 2017. @article{luo2017prostate, title = {A prostate cancer risk element functions as a repressive loop that regulates HOXA13}, author = {Zhifei Luo and Suhn Kyong Rhie and Fides D Lay and Peggy J Farnham}, url = {https://doi.org/10.1016/j.celrep.2017.10.048}, doi = {10.1016/j.celrep.2017.10.048}, year = {2017}, date = {2017-01-01}, journal = {Cell reports}, volume = {21}, number = {6}, pages = {1411--1417}, publisher = {Elsevier}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Pryor, Alan; Yang, Yongsoo; Rana, Arjun; Gallagher-Jones, Marcus; Zhou, Jihan; Lo, Yuan Hung; Melinte, Georgian; Chiu, Wah; Rodriguez, Jose A; Miao, Jianwei GENFIRE: A generalized Fourier iterative reconstruction algorithm for high-resolution 3D imaging Journal Article Scientific reports, 7 (1), pp. 10409, 2017. @article{pryor2017genfire, title = {GENFIRE: A generalized Fourier iterative reconstruction algorithm for high-resolution 3D imaging}, author = {Alan Pryor and Yongsoo Yang and Arjun Rana and Marcus Gallagher-Jones and Jihan Zhou and Yuan Hung Lo and Georgian Melinte and Wah Chiu and Jose A Rodriguez and Jianwei Miao}, url = {https://doi.org/10.1038/s41598-017-09847-1}, doi = {10.1038/s41598-017-09847-1}, year = {2017}, date = {2017-01-01}, journal = {Scientific reports}, volume = {7}, number = {1}, pages = {10409}, publisher = {Nature Publishing Group}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
Kim, Yoonhee; Kim, Chan; Kwon, Ou Young; Nam, Daewoong; Kim, Sang Soo; Park, Jae Hyun; Kim, Sunam; Gallagher-Jones, Marcus; Kohmura, Yoshiki; Ishikawa, Tetsuya; others, Visualization of a Mammalian Mitochondrion by Coherent X-ray Diffractive Imaging Journal Article Scientific reports, 7 (1), pp. 1850, 2017. @article{kim2017visualization, title = {Visualization of a Mammalian Mitochondrion by Coherent X-ray Diffractive Imaging}, author = {Yoonhee Kim and Chan Kim and Ou Young Kwon and Daewoong Nam and Sang Soo Kim and Jae Hyun Park and Sunam Kim and Marcus Gallagher-Jones and Yoshiki Kohmura and Tetsuya Ishikawa and others}, url = {https://doi.org/10.1038/s41598-017-01833-x}, doi = {10.1038/s41598-017-01833-x}, year = {2017}, date = {2017-01-01}, journal = {Scientific reports}, volume = {7}, number = {1}, pages = {1850}, publisher = {Nature Publishing Group}, keywords = {}, pubstate = {published}, tppubtype = {article} } |
