Using NGS Analysis Tools – Day One

The Collaboratory 610 Charles E Young Drive East - BOYER HALL ROOM 529, Los Angeles, CA, United States

Learn basic concepts in high-throughput data analysis!

Free

Using NGS Analysis Tools – Day Two

The Collaboratory 610 Charles E Young Drive East - BOYER HALL ROOM 529, Los Angeles, CA, United States

Learn basic concepts in high-throughput data analysis!

Free

Using NGS Analysis Tools – Day Three

The Collaboratory 610 Charles E Young Drive East - BOYER HALL ROOM 529, Los Angeles, CA, United States

Learn basic concepts in high-throughput data analysis!

Free

Galaxy for NGS Data Analysis – Day One

The Collaboratory 610 Charles E Young Drive East - BOYER HALL ROOM 529, Los Angeles, CA, United States

Learn how to analyze NGS data using Galaxy!

Free

Galaxy for NGS Data Analysis – Day Two

The Collaboratory 610 Charles E Young Drive East - BOYER HALL ROOM 529, Los Angeles, CA, United States

Learn how to analyze NGS data using Galaxy!

Free

W6: BS-DNA Methylation Analysis with Hoffman2 and R

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

This workshop will introduce the basic principles of DNA methylation and briefly describe available methods for DNA methylation assessment, focusing on bisulfite sequencing (BS-Seq). We will cover the principles of BSseq preprocessing, alignment and methylation calling, differential methylation analysis, annotation and visualization. Attendees will have the opportunity to work on real DNA methylation data provided […]

W2: Using NGS Analysis Tools

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

High-throughput sequencing technology involves a number of concepts and techniques that shape a project before application-specific processes are utilized. First, this workshop introduces the more “universal” aspects of high-throughput sequence analysis—from experimental design to sequencing and alignment methods. Next, this workshop covers common file formats for sequence data and limitations of sequencing technologies. We will […]