Determination of the nanoparticle- and cell-specific toxicological mechanisms in 3D liver spheroids using scRNAseq analysis

Jiulong Li, Graciel Diamante, In Sook Ahn, Darren Wijaya, Xiang Wang, Chong Hyun Chang, Sung-min Ha, Kavya Immadisetty, Huan Meng, André Nel, Xia Yang, Tian Xia, Determination of the nanoparticle- […]

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Ketogenic diet therapy for pediatric epilepsy is associated with alterations in the human gut microbiome that confer seizure resistance in mice

Lum, G., Ha, S., Olson, C., Paramo, Jorge., Reyes, B., Matsumoto, Joyce., Yang, X., and Hsiao, Y. (2023) Ketogenic diets for pediatric epilepsy are associated with alterations in the gut mirobiome that […]

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Relationships and Mendelian Randomization of Gut Microbe-Derived Metabolites with Metabolic Syndrome Traits in the METSIM Cohort

Mirzaei, S., DeVon, H. A., Cantor, R. M., Cupido, A. J., Pan, C., Ha, S. M., Fernandes Silva, L., Hilser, J. R., Hartiala, J., Allayee, H., Rey, F. E., Laakso, […]

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Single cell multiomics systems biology for molecular toxicity

Graciel Diamante, Sung Min Ha, Darren Wijaya, Xia Yang, Single cell multiomics systems biology for molecular toxicity,Current Opinion in Toxicology, Volume 39, 2024, 100477, ISSN 2468-2020, https://doi.org/10.1016/j.cotox.2024.100477.

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Complete genomes of two Variovorax endophytes isolated from surface-sterilized alfalfa nodules

Hirsch AM, Humm E, Rubbi M, del Vecchio G, Ha SM, Pellegrini M, Gunsalus RP.2024.Complete genomes of two Variovorax endophytes isolated from surface-sterilized alfalfa nodules. Microbiol Resour Announc13:e00336-24.https://doi.org/10.1128/mra.00336-24

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Genome of Dietzia cinnamea 55, a desert-isolated microbe with plant growth-promoting properties for grain crops

Hirsch AM, Khan N, Humm E, Rubbi M, Del Vecchio G, Ha SM, Pellegrini M, Gunsalus RP.2024.Genome of Dietzia cinnamea 55, a desert-isolated microbe with plant growth-promoting properties for grain […]

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DNA contamination within recombinant adeno-associated virus preparations correlates with decreased CD34+ cell clonogenic potential

Christopher R. Luthers, Sung-Min Ha, Annika Mittelhauser, Marco Morselli, Joseph D. Long, Caroline Y. Kuo, Zulema Romero, Donald B. Kohn, DNA contamination within recombinant adeno-associated virus preparations correlates with decreased […]

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A genomic analysis reveals the diversity of cellulosome displaying bacteria

Minor CM, Takayesu A, Ha SM, Salwinski L, Sawaya MR, Pellegrini M, Clubb RT. A genomic analysis reveals the diversity of cellulosome displaying bacteria. Front Microbiol. 2024 Oct 30;15:1473396. doi: […]

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Gut-microbiota-based ensemble model predicts prognosis of pediatric inflammatory bowel disease

Ha SM, Lee K, Kim GH, Hurych J, Cinek O, Shim JO. Gut-microbiota-based ensemble model predicts prognosis of pediatric inflammatory bowel disease. iScience. 2024 Nov 22;27(12):111442. doi: 10.1016/j.isci.2024.111442. PMID: 39691780; […]

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Isolated from a Surface-Sterilized Fava Bean Nodule. Microbiology Resource Announcements.

Hirsch AM, Humm E, Rubbi L, Del Vecchio G, Ha SM, Pellegrini M, Gunsalus RP.2024.Complete genome of Variovorax sp. EBFNA2, isolated from a surface-sterilized fava bean nodule. Microbiol Resour Announc13:e00762-24.https://doi.org/10.1128/mra.00762-24

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