Workshop Description (Introductory Course)

MATLAB is a powerful, high-level programming language for numerical computation, visualization, and application development. This workshop will start by introducing the MATLAB environment and then cover working with arrays and matrices, loops and conditional statements, writing your own functions, working with files and visualizing your data. The final day will briefly introduce utilizing MATLAB to solve differential equations and the basics of computational systems biology modeling using MATLAB. The course is supplemented with many hands-on exercises. The workshop is suitable for those with or without coding experience in other languages. No computational knowledge is assumed and no prerequisite workshops are required, however the Unix workshop (workshop 1) may be a useful foundation.

Workshop Materials

The slides for day 1 can be found here.

Section 1: Intro and the MATLAB development environment
Video

Section 2: Basic variables
Video

Section 3: Matrices
Video

Section 4: Printing and more matrices
Video

Section 5: Our first script
Video

Section 6: Data types
Video

Section 7: The if statement
Video

Slides for day 2 can be found here.

Section 8: Advanced if statements

Video
Section 9: For and while loops
Video
Section 10: Advanced matrices
Video
Section 11: Cell Arrays
Section 12: Our first function
Section 13: Our first function 2 and getting help

Slides for day 3 can be found here.

Section 14: Writing to files
Video
Section 15: Basic plotting
Video
Section 16: Bar graphs
Video
Section 17: Learning plots through the property editor
Video
Section 18: Introduction to dynamical systems modeling
Video

Technical Requirements

  • Attendees are required to have a Hoffman2 account. To apply for an account, click here. UCLA participants who lack a faculty sponsor and non-UCLA participants may apply for a temporary Hoffman2 account, requesting sponsorship from Collaboratory Workshops.
  • MATLAB – https://www.mathworks.com/products/matlab.html
  • We strongly encourage attendees to bring a laptop capable of accessing UCLA’s WiFi.

Instructor

Dr. Amandine Gamble is a postdoc in the Lloyd-Smith lab in the Department of Ecology and Evolutionary Biology. Her research focuses on the biological mechanisms driving infectious disease dynamics, from the cellular to the species community scale. In particular, she develops mechanistic models aiming at identifying the molecular and ecological drivers of pathogen transmission and virulence across animal species from laboratory and field data. Dr. Gamble earned her D.VM. from Alfort National Veterinary School, her M.S. in Ecophysiology and Animal Behavior from Strasbourg University, and her Ph.D. in Ecology and Population Biology from Montpellier University in France. Outside the lab, Amandine enjoys sharing her research with the public and exploring the Los Angeles area through photography and food tasting.
Email:
amandinegamble@g.ucla.edu

Videos

Reviews

Ying was very helpful, walked around and made sure everyone understood what he taught before moving on.
Ying is fantastic in teaching Matlab!

Workshop Details

Prerequisites: None
Length: 3 days, 3 hrs per day
Level: Introductory
Location: Boyer 529
Seats Available: 28

Fall 2021 Dates

Oct. 12, 13, and 14
9:30 AM to 12:00 PM

REGISTRATION IS CLOSED!