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Relationships and Mendelian Randomization of Gut Microbe-Derived Metabolites with Metabolic Syndrome Traits in the METSIM Cohort
Mirzaei, S., DeVon, H. A., Cantor, R. M., Cupido, A. J., Pan, C., Ha, S. M., Fernandes Silva, L., Hilser, J. R., Hartiala, J., Allayee, H., Rey, F. E., Laakso, […]
June 26, 2025
Therapy of autoimmune inflammation in sporadic amyotrophic lateral sclerosis: Dimethyl fumarate and H-151 down-regulate inflammatory cytokines in the cGAS-STING pathway
Zamiri K, Kesari S, Paul K, Hwang SH, Hammock B, Kaczor-Urbanowicz KE, Urbanowicz A, Gao L, Whitelegge J, Fiala M. Therapy of autoimmune inflammation in sporadic amyotrophic lateral sclerosis: Dimethyl […]
August 17, 2023
Machine learning to predict ceftriaxone resistance within a global genomic database of Neisseria gonorrhoeae genomes using single nucleotide polymorphisms.
Ha, S., Lin, E., Klausner, J., and Adamson, P.
November 30, 2023
Polyunsaturated Fatty Acids Mend Macrophage Transcriptome, Glycome, and Phenotype in the Patients with Neurodegenerative Diseases, Including Alzheimer’s Disease
Dover M, Moseley T, Biskaduros A, Paulchakrabarti M, Hwang SH, Hammock B, Choudhury B, Kaczor-Urbanowicz KE, Urbanowicz A, Morselli M, Dang J, Pellegrini M, Paul K, Bentolila LA, Fiala M. […]
Ketogenic diet therapy for pediatric epilepsy is associated with alterations in the human gut microbiome that confer seizure resistance in mice
Lum GR, Ha SM, Olson CA, Blencowe M, Paramo J, Reyes B, Matsumoto JH, Yang X, Hsiao EY. Ketogenic diet therapy for pediatric epilepsy is associated with alterations in the […]
June 25, 2025
Genetic architecture of heart mitochondrial proteome influencing cardiac hypertrophy
Chella Krishnan K, El Hachem EJ, Keller MP, Patel SG, Carroll L, Vegas AD, Gerdes Gyuricza I, Light C, Cao Y, Pan C, Kaczor-Urbanowicz KE, Shravah V, Anum D, Pellegrini […]
November 30, 2023
Prostate lineage-specific metabolism governs luminal differentiation and response to antiandrogen treatment
Giafaglione JM, Crowell PD, Delcourt AML, Hashimoto T, Ha SM, Atmakuri A, Nunley NM, Dang RMA, Tian M, Diaz JA, Tika E, Payne MC, Burkhart DL, Li D, Navone NM, […]
June 25, 2025
Therapy of autoimmune inflammation in sporadic amyotrophic lateral sclerosis: Dimethyl fumarate and H-151 downregulate inflammatory cytokines in the cGAS-STING pathway
Zamiri K, Kesari S, Paul K, Hwang SH, Hammock B, Kaczor-Urbanowicz KE, Urbanowicz A, Gao L, Whitelegge J, Fiala M. Therapy of autoimmune inflammation in sporadic amyotrophic lateral sclerosis: Dimethyl […]
November 30, 2023
Ketogenic diet therapy for pediatric epilepsy is associated with alterations in the human gut microbiome that confer seizure resistance in mice
Lum, G., Ha, S., Olson, C., Paramo, Jorge., Reyes, B., Matsumoto, Joyce., Yang, X., and Hsiao, Y. (2023) Ketogenic diets for pediatric epilepsy are associated with alterations in the gut mirobiome that […]
June 26, 2025
Reliability of Genetic Alterations in Predicting Ceftriaxone Resistance in Neisseria gonorrhoeae Globally
Lin EY, Adamson PC, Ha SM, Klausner JD. Reliability of Genetic Alterations in Predicting Ceftriaxone Resistance in Neisseria gonorrhoeae Globally. Microbiol Spectr. 2022 Apr 27;10(2):e0206521. doi: 10.1128/spectrum.02065-21. Epub 2022 Mar […]
November 30, 2023
Neurotoxicity of diesel exhaust extracts in zebrafish and its implications for neurodegenerative disease
Ha, S.M., Barnhill, L.M., Li, S. et al. Neurotoxicity of diesel exhaust extracts in zebrafish and its implications for neurodegenerative disease. Sci Rep 12, 19371 (2022). https://doi.org/10.1038/s41598-022-23485-2
June 25, 2025
Cross-tissue multiomics studies reveal gut-brain interactions mediating the effect of Akkermansia muciniphila in counteracting fructose-induced obesity
Sung Min Ha, In-Sook Ahn, Thomas Kowal-safron, Justin Yoon, Graciel Diamante, Ingrid Cely, Guanglin Zhang, Susana Wang, Xia Yang bioRxiv 2022.09.06.506855; doi: https://doi.org/10.1101/2022.09.06.506855
An adjuvant strategy enabled by modulation of the physical properties of microbial ligands expands antigen immunogenicity
Borriello F, Poli V, Shrock E, Spreafico R, Liu X, Pishesha N, Carpenet C, Chou J, Di Gioia M, McGrath ME, Dillen CA, Barrett NA, Lacanfora L, Franco ME, Marongiu […]
Determination of the nanoparticle- and cell-specific toxicological mechanisms in 3D liver spheroids using scRNAseq analysis
Jiulong Li, Graciel Diamante, In Sook Ahn, Darren Wijaya, Xiang Wang, Chong Hyun Chang, Sung-min Ha, Kavya Immadisetty, Huan Meng, André Nel, Xia Yang, Tian Xia, Determination of the nanoparticle- […]
June 26, 2025
Neurotoxicity of Diesel Exhaust Extracts in an In Vivo Model: Implications for Neurodegenerative Disease
Ha, S, Barnhill, L, Li, S., and Bronstein. (2022) J. Neurotoxicity of Diesel Exhaust Extracts in an In Vivo Model: Implications for Neurodegenerative Disease. Scientific Reports (https://doi.org/10.1038/s41598-022-23485-2)
Combining ReACp53 with Carboplatin to Target High-Grade Serous Ovarian Cancers
Neal A, Lai T, Singh T, Rahseparian N, Grogan T, Elashoff D, Scott P, Pellegrini M, Memarzadeh S. Combining ReACp53 with Carboplatin to Target High-Grade Serous Ovarian Cancers. Cancers. 2021; […]
November 30, 2023
Modulation of attention and stress with arousal: The mental and physical effects of riding a motorcycle.
Vaughn, D. A., Maggiora, M. B., Vaughn, K. J., Maggiora, C. J., Tavakoli, A.-V., Liang, W., Zava, D., Cohen, M. S., & Lenartowicz, A. (2021). Modulation of attention and stress […]
June 26, 2025
Using a public database of Neisseria gonorrhoeae genomes to detect mutations associated with zoliflodacin resistance
aul C Adamson, Eric Y Lin, Sung-Min Ha, Jeffrey D Klausner, Using a public database of Neisseria gonorrhoeae genomes to detect mutations associated with zoliflodacin resistance, Journal of Antimicrobial Chemotherapy, […]
November 30, 2023
Inhibition of microbiota-dependent TMAO production attenuates chronic kidney disease in mice
Zhang, W., Miikeda, A., Zuckerman, J. et al. Inhibition of microbiota-dependent TMAO production attenuates chronic kidney disease in mice. Sci Rep 11, 518 (2021). https://doi.org/10.1038/s41598-020-80063-0
Mergeomics 2.0: a web server for multi-omics data integration to elucidate disease networks and predict therapeutics
Ding J, Blencowe M, Nghiem T, Ha S, Chen YW, Li G, Yang X. Mergeomics 2.0: a web server for multi-omics data integration to elucidate disease networks and predict therapeutics. […]
June 26, 2025
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