Past Events

  • W23: Advanced Cytoscape

    ZOOM CA, United States

    The workshop will cover experimental approaches to protein interaction determination; processing and presentation of interaction data available from online resources, and the role of interaction data in the interpretation of […]

  • W8: Variant Calling with GATK

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    This workshop uses materials developed by the Broad Institute to teach Variant Discovery with GATK.  Attendees with no prior experience in variant calling are recommended to review all of the […]

  • Career Workshop for PhDs and Postdocs

    Boyer 159 611 Charles E. Young Dr. E., Los Angeles, CA, United States

    Join us for a tailored workshop designed to empower you with the skills and knowledge needed to excel in the competitive landscape of academia, industry, and beyond. Learn from experienced […]

  • W13: Genetic Analysis (VCF-Plink)

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    High-throughput sequencing technologies have allowed researchers to extract DNA at the individual, population, and species levels. In this workshop, students will learn how to analyze and interpret population-level genetic information […]

  • W12: Intro to MATLAB

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    MATLAB is a powerful, high-level programing language for numerical computation, visualization, and application development. This workshop will start by introducing the MATLAB environment and then cover working with arrays and […]

  • W7: ChIP-seq Analysis

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    This workshop aims to provide skills needed to address principles of the assay, quality assessment, sequencing depth, data processing and functional downstream analyses of ChIP-seq datasets. Students will have opportunities to practice […]

  • W32: GitHub/Docker

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    Learn how to make your applications ready for production and distribution. This workshop will give you your introduction to setting up version control and containerization for your applications to ensure that changes are tracked and dependencies are documented and automatically installed.  Git and Docker allow developers and users to quickly replicate code and computing environments […]

  • W11: Metagenomics Analysis with Python and R

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    This workshop provides an introduction to the microbiome analyses from the raw sequence data generated from the next-generation sequencing platforms. We will cover how to perform the 16S rRNA-based analysis […]

  • W6: BS-DNA Methylation Analysis with Hoffman2 and R

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    This workshop will introduce the basic principles of DNA methylation and briefly describe available methods for DNA methylation assessment, focusing on bisulfite sequencing (BS-Seq). We will cover the principles of […]

  • W36: Mergeomics for Multiomics Integration

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    Mergeomics is a computational tool designed to elucidate the underlying pathways, networks, and key regulators of complex diseases by integrating multi-omics data (genomics, transcriptomics, epigenomics, proteomics, etc). With use of […]