An epigenetic human cytomegalovirus infection score predicts viremia risk in seropositive lung transplant recipients

Fei‑Man Hsu, Rashmi P. Mohanty, Liudmilla Rubbi, Michael Thompson, Harry Pickering, Elaine F. Reed, John R. Greenland, Joanna M. Schaenman, and Matteo Pellegrini. An epigenetic human cytomegalovirus infection score predicts […]

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DNA methylation predicts infection risk in kidney transplant recipients

Fei‑Man Hsu, Harry C. Pickering, Liudmilla Rubbi, Michael Thompson, Elaine F Reed, Matteo Pellegrini, and Joanna M Schaenman. DNA methylation predicts infection risk in kidney transplant recipients. Life Science Alliance, […]

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Gut-microbiota-based ensemble model predicts prognosis of pediatric inflammatory bowel disease

 Ha S, Lee K, Kim G, and Shim J. Gut Microbiota-Based Ensemble Model Predicts Prognosis Of Pediatric Inflammatory Bowel Disease. iScience. 27(12):111442. 2024 DOI: 10.1016/j.isci.2024.111442

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Complete genome of Variovorax sp. EBFNA2, isolated from a surface-sterilized fava bean nodule

Hirscha A, Humm E, Rubbia M, Vecchioa G, Ha S, Pellegrini M, and Gunsalus R. Complete Genome of Variovorax sp. EBFNA2, Isolated from a Surface-Sterilized Fava Bean Nodule. Microbiology Resource Announcements. 13:e00762-24. 2024 DOI: 10.1128/mra.00762-24

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Complete genomes of Mucilaginibacter sabulilitoris SNA2 and Mucilaginibacter sp. cycad4: microbes with the potential for plant growth promotion

Hirsch AM, Humm E, Rubbi L, Del Vecchio G, Ha SM, Pellegrini M, Gunsalus RP.2025.Complete genomes of Mucilaginibacter sabulilitoris SNA2 and Mucilaginibacter sp. cycad4: microbes with the potential for plant […]

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Olfactory ensheathing cells from adult female rats are hybrid glia that promote neural repair

Patricia E Phelps, Sung Min Ha, Rana R Khankan, Mahlet A Mekonnen, Giovanni Juarez, Kaitlin L Ingraham Dixie, Yen-Wei Chen, Xia Yang (2025) Olfactory ensheathing cells from adult female rats […]

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Mergeomics 2.0: a web server for multi-omics data integration to elucidate disease networks and predict therapeutics

Ding J, Blencowe M, Nghiem T, Ha S, Chen YW, Li G, Yang X. Mergeomics 2.0: a web server for multi-omics data integration to elucidate disease networks and predict therapeutics. […]

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Neurotoxicity of Diesel Exhaust Extracts in an In Vivo Model:  Implications for Neurodegenerative Disease

Ha, S, Barnhill, L, Li, S., and Bronstein. (2022) J. Neurotoxicity of Diesel Exhaust Extracts in an In Vivo Model:  Implications for Neurodegenerative Disease. Scientific Reports (https://doi.org/10.1038/s41598-022-23485-2)

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Determination of the nanoparticle- and cell-specific toxicological mechanisms in 3D liver spheroids using scRNAseq analysis

Jiulong Li, Graciel Diamante, In Sook Ahn, Darren Wijaya, Xiang Wang, Chong Hyun Chang, Sung-min Ha, Kavya Immadisetty, Huan Meng, André Nel, Xia Yang, Tian Xia, Determination of the nanoparticle- […]

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Ketogenic diet therapy for pediatric epilepsy is associated with alterations in the human gut microbiome that confer seizure resistance in mice

Lum, G., Ha, S., Olson, C., Paramo, Jorge., Reyes, B., Matsumoto, Joyce., Yang, X., and Hsiao, Y. (2023) Ketogenic diets for pediatric epilepsy are associated with alterations in the gut mirobiome that […]

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