• W20: Single-Cell RNA-Seq Analysis with R

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    This workshop aims to introduce the basic concepts and algorithms for single-cell RNA-seq analysis. It will help participants obtain a better idea of how to use scRNA-seq technology, from considerations in experimental design to data analysis and interpretation. This workshop can serve researchers who are interested in designing an scRNA-seq study or who have acquired […]

  • W9: Intro to Python

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    This workshop will cover the basic concepts of Python programming. The course is supplemented with many hands-on exercises with emphasis given towards computational biology use cases.

  • W1A: Unix command line I

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    Unix is a command-line-based platform that is a highly powerful and flexible tool for data management and analysis. First, this workshop introduces the basic concepts of UNIX operating system and […]

  • W2: Using NGS Analysis Tools

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    High-throughput sequencing technology involves a number of concepts and techniques that shape a project before application-specific processes are utilized. First, this workshop introduces the more “universal” aspects of high-throughput sequence […]

  • W18: Advanced Python

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    This workshop will cover some more advanced topics in python including an overview of object-oriented python (this will not be an in-depth course on object-oriented programming), use of the numpy […]

  • W3: Intro to R and Data Visualization

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    R (www.r-project.org) is a free software environment for statistical computing and graphics. First, this workshop introduces basic concepts, syntax, and usage in R programming, statistical analysis, and visualization techniques. We will conduct hands-on tutorials throughout the session, giving attendees a chance to see R in action. This course is a pre-requisite for several other Collaboratory […]

  • W17: Machine Learning with Python

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    This workshop will cover the basic principles involved in the applications mentioned above, such as pattern recognition, linear and non-linear regression and cluster analysis. The workshop will be oriented towards hands-on activities, starting from the basics of how to load and prepare biological datasets in a Python environment.