Events for March 6, 2023 - January 30, 2023

  • W22: Intro to Cytoscape

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    The workshop introduces Cytoscape (https://cytoscape.org/) – an open source platform for retrieval and visualization of complex biological interactions that are available from public interaction resources: The IMEx Consortium (https://www.imexconsortium.org/), STRING (https://string-db.org/) and BioGIRD (https://thebiogrid.org/). It covers querying for interactions data using built-in search interface, interaction data cleanup and visualization as well as overlying of the […]

  • W4: Galaxy for NGS Data Analysis

    529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

    Galaxy (https://usegalaxy.org/) is a web-based infrastructure for bioinformatics application. First, this workshop introduces participants to using Galaxy for analysis of Next-Generation Sequencing data. Next, this workshop covers the structure of Galaxy, data format and manipulation, obtaining and sharing data, and building and sharing workflows. We will use the tools installed on the UCLA galaxy to […]

  • QCBio Research Seminar: Guanao Yan (Li JJ), Graduate Student in Statistics

    Boyer 159 611 Charles E. Young Dr. E., Los Angeles, CA, United States

    TITLE: "scReadSim: a single-cell RNA-seq and ATAC-seq read simulator." ABSTRACT: Rapid advances of single-cell RNA-seq and ATAC-seq technologies have propelled the development of many computational tools, benchmarking of which demands […]

  • QCBio Research Seminar: Roni Haas (Boutros), Postdoc in Human Genetics

    Boyer Hall 159

    TITLE: "Proteogenomic characterization of the molecular determinants of prostate cancer radioresistance." ABSTRACT: Prostate Cancer (PC), the second most common cause of cancer death in men, is frequently treated using radiotherapy with […]