Upcoming Events
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W24: Cancer Genomics
529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United StatesAs we step into the era of precision medicine, the need for extensive genomic data analysis is more pressing than ever. With the advent of high-throughput technologies, a plethora of genomic, transcriptomic, and epigenomic datasets from cancer patients have been sequenced, providing a wealth of data for systematic bioinformatics analysis. This workshop is tailored to […]
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W27: Systems biology of metabolism – workflows and resources for multi-omics data integration
ZOOM CA, United StatesThe application of omics (i.e., metabolomics, proteomics, transcriptomics, genomics) has become greatly popular in the life sciences. These technologies unlock the investigation of metabolism across thousands of genes, proteins, and […]
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Frontiers in Computational Biosciences Seminar Series: Jian Zeng, PhD, Group Leader – Centre for Population and Disease Genomics – Institute for Molecular Bioscience The University of Queensland – Australia
ZOOM CA, United StatesTITLE: “Leveraging functional annotations to enhance trait prediction and biological discovery”
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W37: Applications of Large Language Models
529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United StatesThis 3-day interactive workshop introduces the overarching principles guiding generative modeling and specifically Large-Scale Language Models (LLM), their application in Python for inference, and specific use-cases in Genomics. Experience with Python is necessary, and basic knowledge about ML workflows is preferred. At the end of this workshop, you WILL be comfortable with loading, inferencing and […]
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Frontiers in Computational Biosciences Seminar Series: Kalli Kappel, PhD, Assistant Professor, Department of Chemistry & Biochemistry, UCLA
Boyer 159 611 Charles E. Young Dr. E., Los Angeles, CA, United StatesTITLE: "TBD"
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W5a: RNA-seq I Analysis
529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United StatesRNA-seq I aims to provide an introduction and the basics tools to process raw RNA-seq data on a cluster machine (Hoffman2). The workshop can serve also as a starting point to develop a gene expression project. This workshop is divided in three days that will cover major steps of processing RNA-seq. To facilitate learning, the […]
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W25: Population Genetics Modeling
529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United StatesIn order to make inferences based on genomic data, it is useful to understand the evolutionary forces that underlie observed genetic variation. The field of population genetics offers theoretical tools to test predictions, gain intuition, and even generate training data for statistical and deep learning models. However, population genetics simulations have historically been slow and […]
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Frontiers in Computational Biosciences Seminar Series: Yi Zhang, PhD, Assistant Professor, Neurosurgery and Biostatistics & Bioinformatics, Duke University
Boyer 159 611 Charles E. Young Dr. E., Los Angeles, CA, United StatesTITLE: "Interpretable machine learning methods to understand tissue heterogeneity using large-scale single-cell genomics and high-definition spatial transcriptomics”
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W5b: RNA-Seq II Analysis
529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United StatesRNA-seq II aims to provide tools for analysis of gene expression data from read counts to biology using R. To facilitate learning, the workshop will use a real case study based approach appropriate for Illumina read data (same as RNA-seq I).
