Events for April 22 - February 26
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W14: Intro to Modern Statistics with R
529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United StatesThrough this seminar, attendees will walk away knowing when and how to run modern versions of traditional statistical analysis. These tests and the underlying bioinformatical lesson about resampling will be of use to most scientific disciplines. The course makes no assumptions about familiarity with traditional statistics – we will simply go through relatable experimental examples […]
W11: Metagenomics Analysis with Python and R
529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United StatesThis workshop provides an introduction to the microbiome analyses from the raw sequence data generated from the next-generation sequencing platforms. We will cover how to perform the 16S rRNA-based analysis using an open-source bioinformatics pipeline QIIME. We will also cover some downstream analyses of the microbiome data beyond QIIME, including statistical analyses and functional analyses.
Frontiers in Computational Biosciences Seminar Series: Chongyi Chen, PhD, Stadtman Investigator, NCI
Boyer 159TITLE: "Quantitative mapping of DNA supercoiling tension throughout the human genome” Hosted by Yi Yin for Genetics & Genomics
W8: Variant Calling with GATK
529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United StatesThis workshop uses materials developed by the Broad Institute to teach Variant Discovery with GATK. Attendees with no prior experience in variant calling are recommended to review all of the materials below before coming to the workshop. This early preparation will allow a focus on the specific issues of running GATK on the UCLA hoffman2 […]
Frontiers in Computational Biosciences Seminar Series: Katherine L. Nathanson, MD, Deputy Director Penn Cancer Center, University of Pennsylvania
Boyer 159 611 Charles E. Young Dr. E., Los Angeles, CA, United StatesTITLE: "The evolving landscape of hereditary breast cancer" Hosted by Paul Spellman for Genetics & Genomics and UCLA JCCC
Frontiers in Computational Biosciences Seminar Series: Alkes Price, PhD, Professor, Harvard School of Public Health
Boyer 159 611 Charles E. Young Dr. E., Los Angeles, CA, United StatesTITLE: “Functional architectures of complex disease” Hosted by Noah Zaitlen for Genetics & Genomics
Frontiers in Computational Biosciences Seminar Series: Alexis Battle, PhD, Professor, Biomedical Engineering, Computer Science and Genetics Medicine Director, Malone Center for Engineering in Healthcare, Johns Hopkins University
Boyer 159TITLE: “Multi-omic and temporal data for rare and common genetic variation”
W9: Intro to Python
529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United StatesThis workshop will cover the basic concepts of Python programming. The course is supplemented with many hands-on exercises with emphasis given towards computational biology use cases.
W1: Unix command line I
529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United StatesUnix is a command-line-based platform that is a highly powerful and flexible tool for data management and analysis. First, this workshop introduces the basic concepts of UNIX operating system and shell scripting. We will explore essential hands-on skills to confidently use the command line interface on either a local (laptop) or a remote (hoffman2 cluster) […]
