QCBio Research Seminar in collaboration with B.I.G. Summer: Valerie Arboleda

ZOOM CA, United States

TITLE: “From Bench to Vending Machine: Development and Deployment of Novel Diagnostic testing for SARS-CoV-2 using Genomic Technology” ABSTRACT: Frequent and widespread testing of members of the population who are asymptomatic for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is essential for the mitigation of the transmission of the virus. Despite the recent increases in testing capacity, tests […]

QCBio Research Seminar: Giovanni Quinones Valdez (Xiao), Grad student in Bioengineering

ZOOM CA, United States

TITLE: "scAllele, a versatile tool for the detection and analysis of variants in scRNA-seq." ABSTRACT: Single-cell RNA sequencing (scRNA-seq) data contain rich information at the gene, transcript, and nucleotide levels. Most analyses of scRNA-seq have focused on gene expression profiles, and it remains challenging to extract nucleotide variants and isoform-specific information. Here, we present scAllele, […]

QCBio Research Seminar: Ulzee An (Sankararaman), Grad student in Computer Science

ZOOM CA, United States

TITLE: "AutoComplete: Deep Learning-based Phenotype Imputation" ABSTRACT: Health data has become increasingly available, vast in scale, and highly missing. For many downstream applications, the ability to accurately impute missing features in health records may tap into additional analytical power which would be unrealized otherwise. While existing imputation methods are applicable, many fall short in one […]

QCBio Research Seminar: Alexander Markowitz (Boutros), Postdoc in Human Genetics

Boyer 159 611 Charles E. Young Dr. E., Los Angeles, CA, United States

TITLE: "A pan-cancer multi-omic analysis of tumor proliferation." ABSTRACT: The underlying mechanisms of dysregulated cellular proliferation in cancer remain unclear; however, it is hypothesized that specific mutations, mutational signatures, evolutionary trajectories and other global (epi)genomic features may be linked to differing rates of proliferation. In this presentation, I will showcase a landscape analysis of cellular proliferation […]