Single-Cell RNA-Seq – Day One

The Collaboratory 610 Charles E Young Drive East - BOYER HALL ROOM 529, Los Angeles, CA, United States

Learn how to analyze single-cell RNA-Seq data!

Free

Single-Cell RNA-Seq – Day Two

The Collaboratory 610 Charles E Young Drive East - BOYER HALL ROOM 529, Los Angeles, CA, United States

Learn how to analyze single-cell RNA-Seq data!

Free

Single-Cell RNA-Seq – Day Three

The Collaboratory 610 Charles E Young Drive East - BOYER HALL ROOM 529, Los Angeles, CA, United States

Learn how to analyze single-cell RNA-Seq data!

Free

W15: Bacterial Genomics

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

The workshop will mainly focus on teaching the fundamentals of bacterial genomics and basic bioinformatics analysis. As a sample data Vibrio cholerae genome will be used as the practice dataset, and workshop participants will try to reproduce the expected results. The workshop will start with detailed instructions on how to quality control the raw sequence […]

W16: Library Prep for NGS

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

This workshop will cover the basis of Next-Gen Sequencing Library Preparation for Illumina Sequencers. Different Library Preparation Techniques (DNA-seq, ChIP-seq, RNA-seq, Methyl-seq) are explained the first and second day in class. The third day, Quality Control steps of the starting input material and final libraries are performed in the Lab (TapeStation). Purification from Primer Dimers […]

W5a: RNA-seq I Analysis

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

RNA-seq I aims to provide an introduction and the basics tools to process raw RNA-seq data on a cluster machine (Hoffman2). The workshop can serve also as a starting point to develop a gene expression project. This workshop is divided in three days that will cover major steps of processing RNA-seq. To facilitate learning, the […]