Variant Discovery with GATK – Day One

The Collaboratory 610 Charles E Young Drive East - BOYER HALL ROOM 529, Los Angeles, CA, United States

Learn to process raw data and call variants!

Free

Variant Discovery with GATK – Day Two

The Collaboratory 610 Charles E Young Drive East - BOYER HALL ROOM 529, Los Angeles, CA, United States

Learn to process raw data and call variants!

Free

Variant Discovery with GATK – Day Three

The Collaboratory 610 Charles E Young Drive East - BOYER HALL ROOM 529, Los Angeles, CA, United States

Learn to process raw data and call variants!

Free

Galaxy for NGS Data Analysis – Day One

The Collaboratory 610 Charles E Young Drive East - BOYER HALL ROOM 529, Los Angeles, CA, United States

Learn how to analyze NGS data using Galaxy!

Free

Galaxy for NGS Data Analysis – Day Two

The Collaboratory 610 Charles E Young Drive East - BOYER HALL ROOM 529, Los Angeles, CA, United States

Learn how to analyze NGS data using Galaxy!

Free

W4: Galaxy for NGS Data Analysis

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

Galaxy (https://usegalaxy.org/) is a web-based infrastructure for bioinformatics application. First, this workshop introduces participants to using Galaxy for analysis of Next-Generation Sequencing data. Next, this workshop covers the structure of […]

W7: ChIP-seq Analysis

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

This workshop aims to provide skills needed to address principles of the assay, quality assessment, sequencing depth, data processing and functional downstream analyses of ChIP-seq datasets. Students will have opportunities to practice […]

W2: Using NGS Analysis Tools

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

High-throughput sequencing technology involves a number of concepts and techniques that shape a project before application-specific processes are utilized. First, this workshop introduces the more “universal” aspects of high-throughput sequence […]

W11: Metagenomics Analysis with Python and R

529 Boyer Hall 611 Charles E Young Dr E,, Los Angeles, CA, United States

This workshop provides an introduction to the microbiome analyses from the raw sequence data generated from the next-generation sequencing platforms. We will cover how to perform the 16S rRNA-based analysis […]